RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 ANXA8P13928 327 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 BPIP17213 487 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 EPORP19235 508 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 GADD45AP24522 165 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 CSNK1DP48730 415 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 SLC14A1Q13336 389 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 CHRNA6Q15825 494 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 KCNA10Q16322 511 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 SYT16Q17RD7 645 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 TIMM50Q3ZCQ8 353 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 ZNF362Q5T0B9 420 aaPredicted RBP13.41□□□□□ -0.26
MKS1-201ENST00000313863 ATXN7L2Q5T6C5 722 aaPredicted RBP13.41□□□□□ -0.26
MKS1-201ENST00000313863 STEAP3Q658P3 488 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 RETSATQ6NUM9 610 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 MBOAT1Q6ZNC8 495 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 PRR23CQ6ZRP0 262 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 CCDC71Q8IV32 467 aaPredicted RBP13.41□□□□□ -0.26
MKS1-201ENST00000313863 DNAJC22Q8N4W6 341 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 DCAF4L2Q8NA75 395 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 HJURPQ8NCD3 748 aaPredicted RBP13.41□□□□□ -0.26
MKS1-201ENST00000313863 DENND6BQ8NEG7 585 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 PIK3R3Q92569 461 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 HTRA1Q92743 480 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 CCDC97Q96F63 343 aaPredicted RBP13.41□□□□□ -0.26
MKS1-201ENST00000313863 APIPQ96GX9 242 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 RHNO1Q9BSD3 238 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 DNAJC11Q9NVH1 559 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 FKBP14Q9NWM8 211 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 ENOPH1Q9UHY7 261 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.41□□□□□ -0.26
MKS1-201ENST00000313863 POFUT2Q9Y2G5 429 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 FCF1Q9Y324 198 aaKnown RBP13.41□□□□□ -0.26
MKS1-201ENST00000313863 NUP214P35658 2090 aaPredicted RBP13.41□□□□□ -0.26
MKS1-201ENST00000313863 ADAMTS4O75173 837 aa13.4□□□□□ -0.26
MKS1-201ENST00000313863 OR56A5P0C7T3 313 aa13.4□□□□□ -0.26
MKS1-201ENST00000313863 DBTP11182 482 aaKnown RBP13.4□□□□□ -0.26
MKS1-201ENST00000313863 CYP2A7P20853 494 aa13.4□□□□□ -0.26
MKS1-201ENST00000313863 ASMTP46597 345 aa13.4□□□□□ -0.26
MKS1-201ENST00000313863 SLC6A12P48065 614 aa13.4□□□□□ -0.26
MKS1-201ENST00000313863 SLC13A2Q13183 592 aa13.4□□□□□ -0.26
MKS1-201ENST00000313863 PDE12Q6L8Q7 609 aaKnown RBP13.4□□□□□ -0.26
MKS1-201ENST00000313863 FUT10Q6P4F1 479 aa13.4□□□□□ -0.26
MKS1-201ENST00000313863 GPR155Q7Z3F1 870 aa13.4□□□□□ -0.26
MKS1-201ENST00000313863 ZNF605Q86T29 641 aa13.4□□□□□ -0.26
MKS1-201ENST00000313863 METTL3Q86U44 580 aaKnown RBP13.4□□□□□ -0.26
MKS1-201ENST00000313863 CHTF18Q8WVB6 975 aa13.4□□□□□ -0.26
MKS1-201ENST00000313863 TPD52L3Q96J77 140 aa13.4□□□□□ -0.26
MKS1-201ENST00000313863 VPS51Q9UID3 782 aa13.4□□□□□ -0.26
MKS1-201ENST00000313863 A8MVJ9 347 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 M0R082 166 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 TBL1XO60907 577 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 PARNO95453 639 aaKnown RBP13.4□□□□□ -0.27
MKS1-201ENST00000313863 CPSF4O95639 269 aaKnown RBP13.4□□□□□ -0.27
MKS1-201ENST00000313863 JUPP14923 745 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 EPHA2P29317 976 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 PCGF2P35227 344 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 NEK2P51955 445 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 AP1S2P56377 157 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 SPANXN2Q5MJ10 180 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 ANXA8L1Q5VT79 327 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 SLX4IPQ5VYV7 408 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 TPGS1Q6ZTW0 290 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 STX19Q8N4C7 294 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 PCSK9Q8NBP7 692 aaKnown RBP13.4□□□□□ -0.27
MKS1-201ENST00000313863 ZNF675Q8TD23 568 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 C7orf34Q96L11 122 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 COPS8Q99627 209 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 DOHHQ9BU89 302 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 C2orf49Q9BVC5 232 aaPredicted RBP13.4□□□□□ -0.27
MKS1-201ENST00000313863 TPT1P8Q9HAU6 139 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 NPAP1Q9NZP6 1156 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 BTNL2Q9UIR0 455 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 STOML2Q9UJZ1 356 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 KLK4Q9Y5K2 254 aa13.4□□□□□ -0.27
MKS1-201ENST00000313863 PLXNB3Q9ULL4 1909 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 MANSC4A6NHS7 340 aaPredicted RBP13.39□□□□□ -0.27
MKS1-201ENST00000313863 AGAP14A8MT82 685 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 TNFRSF11BO00300 401 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 CLDN7O95471 211 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 ABCB1P08183 1280 aaPredicted RBP13.39□□□□□ -0.27
MKS1-201ENST00000313863 IRF1P10914 325 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 MZF1P28698 734 aaPredicted RBP13.39□□□□□ -0.27
MKS1-201ENST00000313863 RRM2P31350 389 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 HNF1BP35680 557 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 ETV6P41212 452 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 ELOAQ14241 798 aaKnown RBP13.39□□□□□ -0.27
MKS1-201ENST00000313863 UGT8Q16880 541 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 LIPJQ5W064 366 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 GPR153Q6NV75 609 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 RSPO2Q6UXX9 243 aaPredicted RBP13.39□□□□□ -0.27
MKS1-201ENST00000313863 ZNF367Q7RTV3 350 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 MYOCQ99972 504 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 TTPALQ9BTX7 342 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 TRMT13Q9NUP7 481 aaKnown RBP13.39□□□□□ -0.27
MKS1-201ENST00000313863 SIRT5Q9NXA8 310 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 SLCO3A1Q9UIG8 710 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 PCDHGA3Q9Y5H0 932 aa13.39□□□□□ -0.27
MKS1-201ENST00000313863 KPNA5O15131 536 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 SCN2BO60939 215 aa13.38□□□□□ -0.27
MKS1-201ENST00000313863 HSD3B1P14060 373 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms