RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 IST1P53990 364 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.58□□□□□ -1.04
COL6A5-202ENST00000312481 GPAT3Q53EU6 434 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 KDELC1Q6UW63 502 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 DCDC5Q6ZRR9 648 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 DCUN1D3Q8IWE4 304 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 POMGNT2Q8NAT1 580 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 SLC2A13Q96QE2 648 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 HDHD5Q9BXW7 423 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 ACTL8Q9H568 366 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 ATG2BQ96BY7 2078 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 ANXA2P2A6NMY6 339 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 POLR1CO15160 346 aaPredicted RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 ANXA2P07355 339 aaKnown RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 ECHS1P30084 290 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 NR4A2P43354 598 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 GALK1P51570 392 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 GPR65Q8IYL9 337 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 TMEM106CQ9BVX2 250 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 POLD4Q9HCU8 107 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 CYB5R1Q9UHQ9 305 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 FBXO9Q9UK97 447 aaPredicted RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 CMAHPQ9Y471 501 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 TEX13CA0A0J9YWL9 993 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 VEGFAP15692 232 aaPredicted RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 IDSP22304 550 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 GADD45AP24522 165 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 CLDN8P56748 225 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 FASTKD3Q14CZ7 662 aaKnown RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 AMHR2Q16671 573 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 NCBP2-AS2Q69YL0 99 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 CAMKVQ8NCB2 501 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 GLIS3Q8NEA6 775 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 LRTOMTQ8WZ04 291 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 DPF3Q92784 378 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 C12orf43Q96C57 262 aaKnown RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 DUS3LQ96G46 650 aaKnown RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 PDLIM5Q96HC4 596 aaKnown RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 CHRAC1Q9NRG0 131 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 PPM1HQ9ULR3 514 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 CDC14AQ9UNH5 594 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 TRIM64BA6NI03 449 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 PIP5K1BO14986 540 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 PPP1R11O60927 126 aaPredicted RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 RENP00797 406 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 UQCRC1P31930 480 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 TBCEQ15813 527 aaPredicted RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 SLC10A6Q3KNW5 377 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 MPP7Q5T2T1 576 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 WDR88Q6ZMY6 472 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 DET1Q7L5Y6 550 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 GPR142Q7Z601 462 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 TPRA1Q86W33 373 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 SIMC1Q8NDZ2 872 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 OR10G2Q8NGC3 310 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 GPR21Q99679 349 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 G6PC3Q9BUM1 346 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 GPATCH2LQ9NWQ4 482 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 TUBAL3A6NHL2 446 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 SLC22A31A6NKX4 558 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 SCAF4O95104 1147 aaKnown RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 XRCC1P18887 633 aaPredicted RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 CSTF2P33240 577 aaKnown RBP eCLIP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 PTGS2P35354 604 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 IGFALSP35858 605 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 TAF13Q15543 124 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 KCNJ8Q15842 424 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 UGT3A2Q3SY77 523 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 SLC9B1Q4ZJI4 515 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 TECRLQ5HYJ1 363 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 C6orf141Q5SZD1 244 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 SLC25A24Q6NUK1 477 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 NPAS3Q8IXF0 933 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 ISG20Q96AZ6 181 aaKnown RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 CD244Q9BZW8 370 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 CIPCQ9C0C6 399 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 COPS7AQ9UBW8 275 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 VEGFDO43915 354 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 ALPPP05187 535 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 FGF3P11487 239 aaPredicted RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 IL7P13232 177 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 PRKAR2AP13861 404 aaKnown RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 GRK5P34947 590 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 OR52E4Q8NGH9 312 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 SMPDL3AQ92484 453 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 TCF25Q9BQ70 676 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 TNFRSF10DQ9UBN6 386 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 ATG12O94817 140 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 RHAGQ02094 409 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 DNAJC14Q6Y2X3 702 aaPredicted RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 ATCAYQ86WG3 371 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 GATAD2BQ8WXI9 593 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 MYRFLQ96LU7 910 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 HOXD1Q9GZZ0 328 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 KLK14Q9P0G3 267 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 PTPRFP10586 1907 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 SAGP10523 405 aaPredicted RBP8.57□□□□□ -1.04
COL6A5-202ENST00000312481 NDUFV1P49821 464 aa8.57□□□□□ -1.04
COL6A5-202ENST00000312481 VGLL4Q14135 290 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms