RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 HNF4AP41235 474 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 MSH2P43246 934 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 DEFB109BQ30KR1 87 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 SOWAHCQ53LP3 525 aaPredicted RBP11.49□□□□□ -0.57
SCFD1-201ENST00000311943 RHBDD2Q6NTF9 364 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 TMPRSS11BQ86T26 416 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 LAPTM4BQ86VI4 370 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 GPSM1Q86YR5 675 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 ZCCHC10Q8TBK6 192 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 EPS8L3Q8TE67 593 aaKnown RBP11.49□□□□□ -0.57
SCFD1-201ENST00000311943 UBLCP1Q8WVY7 318 aaPredicted RBP11.49□□□□□ -0.57
SCFD1-201ENST00000311943 TTC9Q92623 222 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 ZNF285Q96NJ3 590 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 POPDC3Q9HBV1 291 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 CPSF2Q9P2I0 782 aaKnown RBP11.49□□□□□ -0.57
SCFD1-201ENST00000311943 RNF112Q9ULX5 631 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 ACOT9Q9Y305 439 aa11.49□□□□□ -0.57
SCFD1-201ENST00000311943 SCN2AQ99250 2005 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 A0A087WUV0 522 aaPredicted RBP11.48□□□□□ -0.57
SCFD1-201ENST00000311943 A0A0A6YYC8 382 aaPredicted RBP11.48□□□□□ -0.57
SCFD1-201ENST00000311943 ZNF860A6NHJ4 632 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 I3L1I5 382 aaPredicted RBP11.48□□□□□ -0.57
SCFD1-201ENST00000311943 FOXS1O43638 330 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 SH3BGRLO75368 114 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 RFPL1O75677 317 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 SLU7O95391 586 aaKnown RBP11.48□□□□□ -0.57
SCFD1-201ENST00000311943 NR1D1P20393 614 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 SLC6A12P48065 614 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 PRTGQ2VWP7 1150 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 VWA2Q5GFL6 755 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 CPZQ66K79 652 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 CAPN13Q6MZZ7 669 aaPredicted RBP11.48□□□□□ -0.57
SCFD1-201ENST00000311943 LRRC8EQ6NSJ5 796 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 C17orf64Q86WR6 236 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 CSNK1A1LQ8N752 337 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 KIAA1191Q96A73 305 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 TSPAN17Q96FV3 270 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 SLC45A3Q96JT2 553 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 NDC1Q9BTX1 674 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 TRIM55Q9BYV6 548 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 CD274Q9NZQ7 290 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 KLK4Q9Y5K2 254 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 MED13Q9UHV7 2174 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 A0A0G2JN53 185 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 A0A1B0GTL3 188 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 CDC14CA4D256 554 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 SUPT3HB4E1H0 165 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 TK2O00142 265 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 SUPT3HO75486 399 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 ANXA5P08758 320 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 LTA4HP09960 611 aaKnown RBP11.48□□□□□ -0.57
SCFD1-201ENST00000311943 IL1RNP18510 177 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 AP1S2P56377 157 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 TBR1Q16650 682 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 NKAIN1Q4KMZ8 207 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 LCTLQ6UWM7 567 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 TBC1D1Q86TI0 1168 aaPredicted RBP11.48□□□□□ -0.57
SCFD1-201ENST00000311943 PDSS2Q86YH6 399 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 TMEM151AQ8N4L1 468 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 OR9A4Q8NGU2 314 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 MZB1Q8WU39 189 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 TRIM54Q9BYV2 358 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 CHRNA10Q9GZZ6 450 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 KLHL31Q9H511 634 aa11.48□□□□□ -0.57
SCFD1-201ENST00000311943 SOX17Q9H6I2 414 aaPredicted RBP11.48□□□□□ -0.57
SCFD1-201ENST00000311943 FARSAQ9Y285 508 aaKnown RBP11.48□□□□□ -0.57
SCFD1-201ENST00000311943 PPP6CO00743 305 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 MAP3K7O43318 606 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 OR1F1O43749 312 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 CCNT2O60583 730 aaKnown RBP11.47□□□□□ -0.57
SCFD1-201ENST00000311943 CREG1O75629 220 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 TBX6O95947 436 aaPredicted RBP11.47□□□□□ -0.57
SCFD1-201ENST00000311943 SERPIND1P05546 499 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 KLK3P07288 261 aaPredicted RBP11.47□□□□□ -0.57
SCFD1-201ENST00000311943 ENO2P09104 434 aaPredicted RBP11.47□□□□□ -0.57
SCFD1-201ENST00000311943 TSPAN8P19075 237 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 PTPN4P29074 926 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 MAGEA12P43365 314 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 OLR1P78380 273 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 CDC20Q12834 499 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 PFKFB4Q16877 469 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 ZC3H12BQ5HYM0 836 aaKnown RBP11.47□□□□□ -0.57
SCFD1-201ENST00000311943 TRMT10CQ7L0Y3 403 aaKnown RBP11.47□□□□□ -0.57
SCFD1-201ENST00000311943 ADAMTSL2Q86TH1 951 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 OR5T3Q8NGG3 340 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 KIAA1143Q96AT1 154 aaPredicted RBP11.47□□□□□ -0.57
SCFD1-201ENST00000311943 RBCK1Q9BYM8 510 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 TXLNGQ9NUQ3 528 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 WWOXQ9NZC7 414 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 PTBP2Q9UKA9 531 aaKnown RBP11.47□□□□□ -0.57
SCFD1-201ENST00000311943 TCFL5Q9UL49 500 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 NOVA2Q9UNW9 492 aaKnown RBP11.47□□□□□ -0.57
SCFD1-201ENST00000311943 RELNP78509 3460 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 FITM1A5D6W6 292 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 UMODP07911 640 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 CRABP2P29373 138 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 HSD17B3P37058 310 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 HSD17B2P37059 387 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 NAB1Q13506 487 aa11.47□□□□□ -0.57
SCFD1-201ENST00000311943 RAPSNQ13702 412 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms