RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 FEZF1A0PJY2 475 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 SOBPA7XYQ1 873 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 PSMD11O00231 422 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 CLIC1O00299 241 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 RPS9P46781 194 aaKnown RBP14.05□□□□□ -0.16
SMG8-201ENST00000300917 GRHL2Q6ISB3 625 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 RBM44Q6ZP01 1051 aaKnown RBP14.05□□□□□ -0.16
SMG8-201ENST00000300917 C11orf96Q7Z7L8 435 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 OR5AK3PQ8NH89 298 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 TMIGD2Q96BF3 282 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 CPPED1Q9BRF8 314 aaPredicted RBP14.05□□□□□ -0.16
SMG8-201ENST00000300917 KCNH6Q9H252 994 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 NTN4Q9HB63 628 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 LRRK1Q38SD2 2015 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 PCDH7O60245 1069 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 CAPNS1P04632 268 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 GALK1P51570 392 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 RAE1P78406 368 aaKnown RBP14.05□□□□□ -0.16
SMG8-201ENST00000300917 CDK3Q00526 305 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 HYAL1Q12794 435 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 ATP6AP1Q15904 470 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 PNCKQ6P2M8 343 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 TTC33Q6PID6 262 aaPredicted RBP14.05□□□□□ -0.16
SMG8-201ENST00000300917 RIMKLAQ8IXN7 391 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 CSGALNACT1Q8TDX6 532 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 NELL1Q92832 810 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 IMP3Q9NV31 184 aaKnown RBP14.05□□□□□ -0.16
SMG8-201ENST00000300917 EXD2Q9NVH0 621 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 CUEDC1Q9NWM3 386 aaPredicted RBP14.05□□□□□ -0.16
SMG8-201ENST00000300917 ACSL6Q9UKU0 697 aa14.05□□□□□ -0.16
SMG8-201ENST00000300917 EVPLLA8MZ36 301 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 hCG_2039718K7EN88 272 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 APODP05090 189 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 KLK1P06870 262 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 PRPS1L1P21108 318 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 CNPY1Q3B7I2 92 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 TMTC4Q5T4D3 741 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 RD3Q7Z3Z2 195 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 VTCN1Q7Z7D3 282 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 TFAP2CQ92754 450 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 CIDECQ96AQ7 238 aaPredicted RBP14.04□□□□□ -0.16
SMG8-201ENST00000300917 MACROD1Q9BQ69 325 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 BDH2Q9BUT1 245 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 DUSP26Q9BV47 211 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 CD93Q9NPY3 652 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 CCDC177Q9NQR7 707 aaPredicted RBP14.04□□□□□ -0.16
SMG8-201ENST00000300917 OLAHQ9NV23 265 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 NFKBIL1Q9UBC1 381 aaPredicted RBP14.04□□□□□ -0.16
SMG8-201ENST00000300917 RAPGEFL1Q9UHV5 662 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 PNMA8BQ9ULN7 279 aaPredicted RBP14.04□□□□□ -0.16
SMG8-201ENST00000300917 RUVBL1Q9Y265 456 aaKnown RBP14.04□□□□□ -0.16
SMG8-201ENST00000300917 CA5BQ9Y2D0 317 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 DOCK8Q8NF50 2099 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 PIPSLA2A3N6 862 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 MYO1GB0I1T2 1018 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 B4GAT1O43505 415 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 ERN1O75460 977 aaKnown RBP14.04□□□□□ -0.16
SMG8-201ENST00000300917 RAP2AP10114 183 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 PTPN6P29350 595 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 PNLIPRP1P54315 467 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 CPTPQ5TA50 214 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 AGBL4Q5VU57 503 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 TTC23LQ6PF05 361 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 CARM1Q86X55 608 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 TSPAN14Q8NG11 270 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 RMND5BQ96G75 393 aaPredicted RBP14.04□□□□□ -0.16
SMG8-201ENST00000300917 SPATA6Q9NWH7 488 aaPredicted RBP14.04□□□□□ -0.16
SMG8-201ENST00000300917 C5AR2Q9P296 337 aa14.04□□□□□ -0.16
SMG8-201ENST00000300917 TRBV23OR9-2A0A075B6M9 112 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 A0A096LPI6 279 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 FUCA1P04066 466 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 WNT3P56703 355 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 FGL2Q14314 439 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 CYP27C1Q4G0S4 372 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 ZNF385BQ569K4 471 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 ATAT1Q5SQI0 421 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 COMMD6Q7Z4G1 85 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 OR2L2Q8NH16 312 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 TPD52L3Q96J77 140 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 FBXL12Q9NXK8 326 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 CNOT11Q9UKZ1 510 aaKnown RBP14.03□□□□□ -0.16
SMG8-201ENST00000300917 OR52A4PA6NMU1 304 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 H7BY64 318 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 DEAF1O75398 565 aaPredicted RBP14.03□□□□□ -0.16
SMG8-201ENST00000300917 FCGR1AP12314 374 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 CAMK2GQ13555 558 aaPredicted RBP14.03□□□□□ -0.16
SMG8-201ENST00000300917 ZNF852Q6ZMS4 543 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 DHRSXQ8N5I4 330 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 SLC5A11Q8WWX8 675 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 PRAP1Q96NZ9 151 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 SH3GL1Q99961 368 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 TRMT61BQ9BVS5 477 aaKnown RBP14.03□□□□□ -0.16
SMG8-201ENST00000300917 WDR37Q9Y2I8 494 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 TRBV5-3A0A0A0MS03 114 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 H0YIV9 168 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 EPN2O95208 641 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 RASAL1O95294 804 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 FKBP9O95302 570 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 UMPSP11172 480 aa14.03□□□□□ -0.16
SMG8-201ENST00000300917 GSTT1P30711 240 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms