RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 HEBP2Q9Y5Z4 205 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 OR52A4PA6NMU1 304 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 MAGEB17A8MXT2 336 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 FOXE1O00358 373 aaPredicted RBP14.97□□□□□ -0.01
LSM6-201ENST00000296581 ME2P23368 584 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 VHLP40337 213 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 RAB28P51157 221 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 SH3BGRP55822 239 aaPredicted RBP14.97□□□□□ -0.01
LSM6-201ENST00000296581 PHEXP78562 749 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 DDX39BQ13838 428 aaKnown RBP14.97□□□□□ -0.01
LSM6-201ENST00000296581 HIST2H2ACQ16777 129 aaPredicted RBP14.97□□□□□ -0.01
LSM6-201ENST00000296581 TIGD2Q4W5G0 525 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 HIST2H2AA3Q6FI13 130 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 ADNP2Q6IQ32 1131 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 PRMT9Q6P2P2 845 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 FAM129CQ86XR2 697 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 C2orf73Q8N5S3 287 aaPredicted RBP14.97□□□□□ -0.01
LSM6-201ENST00000296581 FRMD1Q8N878 549 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 C11orf24Q96F05 449 aaPredicted RBP14.97□□□□□ -0.01
LSM6-201ENST00000296581 ZBTB18Q99592 522 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 ORAI3Q9BRQ5 295 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 DPY30Q9C005 99 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 TBC1D29Q9UFV1 150 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 TAC3Q9UHF0 121 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 PACSIN3Q9UKS6 424 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.97□□□□□ -0.01
LSM6-201ENST00000296581 DGKBQ9Y6T7 804 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 hCG_2014768A0A024R1R8 64 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 C19orf67A6NJJ6 358 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 TRIM38O00635 465 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 PSMG1O95456 288 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 PCNAP12004 261 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 CDH1P12830 882 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 CLDN8P56748 225 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 PAGE3Q5JUK9 113 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 RD3Q7Z3Z2 195 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 C17orf64Q86WR6 236 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 SLC22A18ASQ8N1D0 253 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 DPP10Q8N608 796 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 OR2L8Q8NGY9 312 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 UBE2E3Q969T4 207 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 PPP1R14BQ96C90 147 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 LRRC58Q96CX6 371 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 APOLD1Q96LR9 279 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 TPSD1Q9BZJ3 242 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 SPNS1Q9H2V7 528 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 CLMPQ9H6B4 373 aa14.97□□□□□ -0.01
LSM6-201ENST00000296581 A0A1W2PPC4 97 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 ETHE1O95571 254 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 SDC1P18827 310 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 FUT4P22083 530 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 AK4P27144 223 aaPredicted RBP14.96□□□□□ -0.01
LSM6-201ENST00000296581 NOXRED1Q6NXP6 359 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 ABHD11Q8NFV4 315 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 OR52E1Q8NGJ3 308 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 RLN3Q8WXF3 142 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 STMN2Q93045 179 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 CLDN23Q96B33 292 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 TMEM168Q9H0V1 697 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 KIR3DX1Q9H7L2 352 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 ADA2Q9NZK5 511 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 ABCD2Q9UBJ2 740 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 CD300AQ9UGN4 299 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 RUVBL1Q9Y265 456 aaKnown RBP14.96□□□□□ -0.01
LSM6-201ENST00000296581 A6NCN8 305 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 KRT36O76013 467 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 RASGRP1O95267 797 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 EML2O95834 649 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 NPPAP01160 153 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 XRCC1P18887 633 aaPredicted RBP14.96□□□□□ -0.01
LSM6-201ENST00000296581 NFYCQ13952 458 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 CCNIQ14094 377 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 KRT33BQ14525 404 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 NCCRP1Q6ZVX7 275 aaPredicted RBP14.96□□□□□ -0.01
LSM6-201ENST00000296581 GJD3Q8N144 294 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 SPEM1Q8N4L4 309 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 CCL4L1Q8NHW4 92 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 JADE3Q92613 823 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 SH3KBP1Q96B97 665 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 SLC39A3Q9BRY0 314 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 ACAT2Q9BWD1 397 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 TBC1D17Q9HA65 648 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 STOML1Q9UBI4 398 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 PPT2Q9UMR5 302 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 ICKQ9UPZ9 632 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 COLEC10Q9Y6Z7 277 aa14.96□□□□□ -0.01
LSM6-201ENST00000296581 FANCMQ8IYD8 2048 aa14.95□□□□□ -0.02
LSM6-201ENST00000296581 IL6P05231 212 aa14.95□□□□□ -0.02
LSM6-201ENST00000296581 TACR1P25103 407 aa14.95□□□□□ -0.02
LSM6-201ENST00000296581 ACTR1BP42025 376 aa14.95□□□□□ -0.02
LSM6-201ENST00000296581 PIK3CBP42338 1070 aa14.95□□□□□ -0.02
LSM6-201ENST00000296581 DGKQP52824 942 aa14.95□□□□□ -0.02
LSM6-201ENST00000296581 ACTR1AP61163 376 aa14.95□□□□□ -0.02
LSM6-201ENST00000296581 RPS13P62277 151 aaKnown RBP14.95□□□□□ -0.02
LSM6-201ENST00000296581 YBX1P67809 324 aaKnown RBP14.95□□□□□ -0.02
LSM6-201ENST00000296581 CCDC92Q53HC0 331 aaPredicted RBP14.95□□□□□ -0.02
LSM6-201ENST00000296581 SAMD4BQ5PRF9 694 aaKnown RBP14.95□□□□□ -0.02
LSM6-201ENST00000296581 CCDC80Q76M96 950 aa14.95□□□□□ -0.02
LSM6-201ENST00000296581 NRROSQ86YC3 692 aa14.95□□□□□ -0.02
LSM6-201ENST00000296581 HID1Q8IV36 788 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms