RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 OR1I1O60431 355 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 MYCLP1P12525 358 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 WDR4P57081 412 aaKnown RBP17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 VSX2P58304 361 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 LRRC26Q2I0M4 334 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 FAM13CQ8NE31 585 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 EPYCQ99645 322 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 RASSF1Q9NS23 344 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 DMTF1Q9Y222 760 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 CAPN5O15484 640 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 S100GP29377 79 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 PDX1P52945 283 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 FAM192AQ9GZU8 254 aa17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 SPIN1Q9Y657 262 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP3-201ENST00000295324 ZNF726A6NNF4 738 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 CXCL12P48061 93 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 DUOXA1Q1HG43 343 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 LIPJQ5W064 366 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 HTR3DQ70Z44 454 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 ARHGAP22Q7Z5H3 698 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 ADGRD2Q7Z7M1 963 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 TICAM1Q8IUC6 712 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 SCML4Q8N228 414 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 C3orf58Q8NDZ4 430 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 UBASH3BQ8TF42 649 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 METTL7AQ9H8H3 244 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 EHD3Q9NZN3 535 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 AK5Q9Y6K8 562 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 C1GALT1C1LP0DN25 315 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 SLC18A2Q05940 514 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 THAP5Q7Z6K1 395 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 ASPGQ86U10 573 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 ZZZ3Q8IYH5 903 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 HERPUD2Q9BSE4 406 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 IFT27Q9BW83 186 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 PGM3O95394 542 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 ENGP17813 658 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 SLC10A2Q12908 348 aaPredicted RBP17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 TAS1R1Q7RTX1 841 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 PLXDC1Q8IUK5 500 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 FAM47BQ8NA70 645 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 SMPD3Q9NY59 655 aaPredicted RBP17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 FAM170BA6NMN3 283 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 MATN2O00339 956 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 LDB2O43679 373 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 NCK1P16333 377 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 BTN2A1Q7KYR7 527 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 AMIGO1Q86WK6 493 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 C17orf62Q9BQA9 187 aa17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 KLF16Q9BXK1 252 aaPredicted RBP17.17■□□□□ 0.34
CDC42EP3-201ENST00000295324 TPST2O60704 377 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 ASGR2P07307 311 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 RBMS1P29558 406 aaKnown RBP17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 TMEM44Q2T9K0 475 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 TGM7Q96PF1 710 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 CGREF1Q99674 301 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 OR8D2Q9GZM6 311 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 RMI1Q9H9A7 625 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 RENP00797 406 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 ARSAP15289 507 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 NUDT1P36639 197 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 RPS9P46781 194 aaKnown RBP17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 SLC7A9P82251 487 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 OR5AK3PQ8NH89 298 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 RPLP0P6Q8NHW5 317 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 GTPBP3Q969Y2 492 aaKnown RBP17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 ZNF689Q96CS4 500 aaPredicted RBP17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 EBF4Q9BQW3 602 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 LDAHQ9H6V9 325 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 PTGES2Q9H7Z7 377 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 PRTFDC1Q9NRG1 225 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 MT-ND1P03886 318 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 RAP2AP10114 183 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 TSACCQ96A04 125 aaPredicted RBP17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 C1GALT1C1Q96EU7 318 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 TRNT1Q96Q11 434 aaKnown RBP17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 SLC46A2Q9BY10 475 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 PLEKHA1Q9HB21 404 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 DLGAP4Q9Y2H0 992 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 LTBP4Q8N2S1 1624 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 DBTP11182 482 aaKnown RBP17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 NR2C1P13056 603 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 ZNF763Q0D2J5 394 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 ZNF542PQ5EBM4 170 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 TMEM198Q66K66 360 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 CHST14Q8NCH0 376 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 OR4K14Q8NGD5 310 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 FZD3Q9NPG1 666 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 PADI2Q9Y2J8 665 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 FOXN2P32314 431 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 NIPAL4Q0D2K0 466 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 HNRNPA1L2Q32P51 320 aaKnown RBP17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 OR2AJ1Q8NGZ0 328 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 SLC25A36Q96CQ1 311 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 ZNF576Q9H609 170 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 MBD2Q9UBB5 411 aa17.16■□□□□ 0.34
CDC42EP3-201ENST00000295324 GRXCR1A8MXD5 290 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 VSTM5A8MXK1 200 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 BHMG1C9JSJ3 638 aaPredicted RBP17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 PLK4O00444 970 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms