RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 RPL34P49207 117 aaKnown RBP13.9□□□□□ -0.18
TMEM47-201ENST00000275954 CCR3P51677 355 aa13.9□□□□□ -0.18
TMEM47-201ENST00000275954 UGT2B15P54855 530 aa13.9□□□□□ -0.18
TMEM47-201ENST00000275954 ZNF542PQ5EBM4 170 aa13.9□□□□□ -0.18
TMEM47-201ENST00000275954 SLC8B1Q6J4K2 584 aa13.9□□□□□ -0.18
TMEM47-201ENST00000275954 HMGN2P46Q86SG4 172 aa13.9□□□□□ -0.18
TMEM47-201ENST00000275954 SPPL3Q8TCT6 385 aa13.9□□□□□ -0.18
TMEM47-201ENST00000275954 HM13Q8TCT9 377 aa13.9□□□□□ -0.18
TMEM47-201ENST00000275954 C12orf43Q96C57 262 aaKnown RBP13.9□□□□□ -0.18
TMEM47-201ENST00000275954 ZNF607Q96SK3 696 aa13.9□□□□□ -0.18
TMEM47-201ENST00000275954 TNFRSF12AQ9NP84 129 aa13.9□□□□□ -0.18
TMEM47-201ENST00000275954 RHCGQ9UBD6 479 aa13.9□□□□□ -0.18
TMEM47-201ENST00000275954 GULP1Q9UBP9 304 aa13.9□□□□□ -0.18
TMEM47-201ENST00000275954 GTF2A1LQ9UNN4 478 aa13.9□□□□□ -0.18
TMEM47-201ENST00000275954 CACNA1CQ13936 2221 aa13.9□□□□□ -0.18
TMEM47-201ENST00000275954 IDSP22304 550 aa13.9□□□□□ -0.19
TMEM47-201ENST00000275954 ABHD18Q0P651 414 aa13.9□□□□□ -0.19
TMEM47-201ENST00000275954 TUBB3Q13509 450 aa13.9□□□□□ -0.19
TMEM47-201ENST00000275954 HSF5Q4G112 596 aaPredicted RBP13.9□□□□□ -0.19
TMEM47-201ENST00000275954 CPA6Q8N4T0 437 aa13.9□□□□□ -0.19
TMEM47-201ENST00000275954 DTWD1Q8N5C7 304 aa13.9□□□□□ -0.19
TMEM47-201ENST00000275954 RAB8BQ92930 207 aa13.9□□□□□ -0.19
TMEM47-201ENST00000275954 SCRN2Q96FV2 425 aa13.9□□□□□ -0.19
TMEM47-201ENST00000275954 C8orf4Q9NR00 106 aa13.9□□□□□ -0.19
TMEM47-201ENST00000275954 ZCCHC3Q9NUD5 404 aaKnown RBP13.9□□□□□ -0.19
TMEM47-201ENST00000275954 ATP6V1HQ9UI12 483 aa13.9□□□□□ -0.19
TMEM47-201ENST00000275954 OARD1Q9Y530 152 aa13.9□□□□□ -0.19
TMEM47-201ENST00000275954 PRSS51A0A1B0GVH4 220 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 PIPSLA2A3N6 862 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.89□□□□□ -0.19
TMEM47-201ENST00000275954 PRAMEF12O95522 483 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 CD1EP15812 388 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 ZNF182P17025 639 aaPredicted RBP13.89□□□□□ -0.19
TMEM47-201ENST00000275954 DOC2AQ14183 400 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 PRR23BQ6ZRT6 265 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 CEP68Q76N32 757 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 ADGRD2Q7Z7M1 963 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 ZFAND4Q86XD8 727 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 CLECL1Q8IZS7 167 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 CLIP4Q8N3C7 705 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 BTN2A2Q8WVV5 523 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 SLC29A3Q9BZD2 475 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 KLHL1Q9NR64 748 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 ENOPH1Q9UHY7 261 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 DLGAP4Q9Y2H0 992 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 SVILO95425 2214 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 LAMA2P24043 3122 aaKnown RBP13.89□□□□□ -0.19
TMEM47-201ENST00000275954 GSTM5P46439 218 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 SPINT3P49223 89 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 ALDH3A2P51648 485 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 GALNT1Q10472 559 aaPredicted RBP13.89□□□□□ -0.19
TMEM47-201ENST00000275954 IFI44LQ53G44 452 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 WDR36Q8NI36 951 aaKnown RBP13.89□□□□□ -0.19
TMEM47-201ENST00000275954 RLN3Q8WXF3 142 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 WBP2Q969T9 261 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 RELTQ969Z4 430 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 HSH2DQ96JZ2 352 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 ART5Q96L15 291 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 COL21A1Q96P44 957 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 GPR78Q96P69 363 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 COPS4Q9BT78 406 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 KLF16Q9BXK1 252 aaPredicted RBP13.89□□□□□ -0.19
TMEM47-201ENST00000275954 LOC100130705A0A1B0GUX0 176 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 RTCAO00442 366 aaKnown RBP13.89□□□□□ -0.19
TMEM47-201ENST00000275954 NPTX1Q15818 432 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 PRAMEF13Q5VWM6 474 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 GALNT13Q8IUC8 556 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 CROCCP3Q8IVE0 287 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 CDK20Q8IZL9 346 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 SVOPLQ8N434 492 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 WFDC5Q8TCV5 224 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 GLYATL1Q969I3 302 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 APIPQ96GX9 242 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 PYURFQ96I23 114 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 ELOVL2Q9NXB9 296 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 CDV3Q9UKY7 258 aaKnown RBP13.89□□□□□ -0.19
TMEM47-201ENST00000275954 CDC14AQ9UNH5 594 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 ZNF232Q9UNY5 417 aa13.89□□□□□ -0.19
TMEM47-201ENST00000275954 RASGRP1O95267 797 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 C6orf47O95873 294 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 SLC16A8O95907 504 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 RPS17P08708 135 aaKnown RBP13.88□□□□□ -0.19
TMEM47-201ENST00000275954 PABPC4LP0CB38 370 aaKnown RBP13.88□□□□□ -0.19
TMEM47-201ENST00000275954 HTR1BP28222 390 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 FEN1P39748 380 aaKnown RBP13.88□□□□□ -0.19
TMEM47-201ENST00000275954 PSMD7P51665 324 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 HEPACAMQ14CZ8 416 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 DUOXA1Q1HG43 343 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 TCTN1Q2MV58 587 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 DPY19L1Q2PZI1 675 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 ZBED5Q49AG3 693 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 EGFLAMQ63HQ2 1017 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 CCSAPQ6IQ19 270 aaPredicted RBP13.88□□□□□ -0.19
TMEM47-201ENST00000275954 TMIGD1Q6UXZ0 262 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 VTCN1Q7Z7D3 282 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 P2RY8Q86VZ1 359 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 TMEM145Q8NBT3 493 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 STON2Q8WXE9 905 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 HTRA1Q92743 480 aa13.88□□□□□ -0.19
TMEM47-201ENST00000275954 HSPBAP1Q96EW2 488 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms