RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 TMEM182Q6ZP80 229 aaPredicted RBP3.95□□□□□ -1.78
CCDC54-201ENST00000261058 KLHDC8BQ8IXV7 354 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 CDK20Q8IZL9 346 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 OR4C3Q8NH37 302 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 HEXDCQ8WVB3 486 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 ZNF606Q8WXB4 792 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 CCDC3Q9BQI4 270 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 PRRG4Q9BZD6 226 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 THAP2Q9H0W7 228 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 VPS33BQ9H267 617 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 UTP6Q9NYH9 597 aaKnown RBP3.95□□□□□ -1.78
CCDC54-201ENST00000261058 SUN2Q9UH99 717 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 CTNNA3Q9UI47 895 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 MAN1B1Q9UKM7 699 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 RAD54L2Q9Y4B4 1467 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 TRBV5-5A0A0J9YX44 114 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 PRAF2O60831 178 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 RPS6KA5O75582 802 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 LUC7L3O95232 432 aaKnown RBP3.95□□□□□ -1.78
CCDC54-201ENST00000261058 VTNP04004 478 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 CD59P13987 128 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 TRPC1P48995 793 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 TEAD2Q15562 447 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 ZNF876PQ49A33 203 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 SPOUT1Q5T280 376 aaKnown RBP3.95□□□□□ -1.78
CCDC54-201ENST00000261058 LYSMD4Q5XG99 296 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 GALNT17Q6IS24 598 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 ZNF790Q6PG37 636 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 PSRC1Q6PGN9 363 aaPredicted RBP3.95□□□□□ -1.78
CCDC54-201ENST00000261058 C16orf87Q6PH81 154 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 C15orf39Q6ZRI6 1047 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 MSANTD1Q6ZTZ1 278 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 SH2D5Q6ZV89 423 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 NOTCH2NLQ7Z3S9 236 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 IQCF2Q8IXL9 164 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 NOA1Q8NC60 698 aaKnown RBP3.95□□□□□ -1.78
CCDC54-201ENST00000261058 GDAP1Q8TB36 358 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 ST6GALNAC6Q969X2 333 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 C4orf45Q96LM5 186 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 LITAFQ99732 161 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 GTPBP2Q9BX10 602 aaKnown RBP3.95□□□□□ -1.78
CCDC54-201ENST00000261058 PITPNM3Q9BZ71 974 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 ATP13A3Q9H7F0 1226 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 ZNF696Q9H7X3 374 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 CHST11Q9NPF2 352 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 DUSP12Q9UNI6 340 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 GAB2Q9UQC2 676 aa3.95□□□□□ -1.78
CCDC54-201ENST00000261058 ARID2Q68CP9 1835 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 STK36Q9NRP7 1315 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 PRR23AA6NEV1 266 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 SLCO1B7G3V0H7 640 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 PSMA7O14818 248 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 MOCS3O95396 460 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 SLC4A1P02730 911 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 VIMP08670 466 aaKnown RBP3.94□□□□□ -1.78
CCDC54-201ENST00000261058 ZNF853P0CG23 659 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 SFTPCP11686 197 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 CEACAM1P13688 526 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 HLA-DPA1P20036 260 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 PAX7P23759 505 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 MT3P25713 68 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 NR0B1P51843 470 aaKnown RBP3.94□□□□□ -1.78
CCDC54-201ENST00000261058 CDR2Q01850 454 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 CACNG1Q06432 222 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 AP1B1Q10567 949 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 TRAP1Q12931 704 aaKnown RBP3.94□□□□□ -1.78
CCDC54-201ENST00000261058 RBM39Q14498 530 aaKnown RBP3.94□□□□□ -1.78
CCDC54-201ENST00000261058 SQLEQ14534 574 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 MEP1BQ16820 701 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 TYSND1Q2T9J0 566 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 GPR33Q49SQ1 333 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 LRRC73Q5JTD7 316 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 G2E3Q7L622 706 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 SPATA21Q7Z572 469 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 MNS1Q8NEH6 495 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 OR1L3Q8NH93 324 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 DNASE1L2Q92874 299 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 SYAP1Q96A49 352 aaPredicted RBP3.94□□□□□ -1.78
CCDC54-201ENST00000261058 C10orf90Q96M02 699 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 AGAP3Q96P47 875 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 PIGQQ9BRB3 760 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 DNAI2Q9GZS0 605 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 TSPYL1Q9H0U9 437 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 INTS10Q9NVR2 710 aaKnown RBP3.94□□□□□ -1.78
CCDC54-201ENST00000261058 ERAP1Q9NZ08 941 aa3.94□□□□□ -1.78
CCDC54-201ENST00000261058 IGHV4-4A0A075B6R2 117 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 FAM25EA8MYX2 175 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 C17orf105B2RV13 164 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 CCL24O00175 119 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 PGLSO95336 258 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 APBB3O95704 486 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 PLGP00747 810 aaPredicted RBP3.93□□□□□ -1.78
CCDC54-201ENST00000261058 IGKV3-20P01619 116 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 C9P02748 559 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 SUPT20HL2P0C7V6 817 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 CCDC172P0C7W6 258 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 MYL6BP14649 208 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 DARSP14868 501 aaKnown RBP3.93□□□□□ -1.78
CCDC54-201ENST00000261058 EPORP19235 508 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 SP100P23497 879 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms