RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 SIGLEC14Q08ET2 396 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 MELKQ14680 651 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 ZNF77Q15935 545 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 DCST1Q5T197 706 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 YTHDF3Q7Z739 585 aaKnown RBP13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 PACS2Q86VP3 889 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 ZSCAN4Q8NAM6 433 aaPredicted RBP13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 PDPRQ8NCN5 879 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 CADM4Q8NFZ8 388 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 FAM81AQ8TBF8 368 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 KCNK12Q9HB15 430 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 PPP4R1LQ9P1A2 415 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 CACNG4Q9UBN1 327 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 TMPRSS11EQ9UL52 423 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 AREL1O15033 823 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 MAFKO60675 156 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 ZBTB11O95625 1053 aaPredicted RBP13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 P2RY2P41231 377 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 LEPRP48357 1165 aaKnown RBP13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 DNAJB13P59910 316 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 TRA2BP62995 288 aaKnown RBP13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 POU6F2P78424 691 aaPredicted RBP13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 IL5RAQ01344 420 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 TYW3Q6IPR3 259 aaKnown RBP13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 CXXC5Q7LFL8 322 aaKnown RBP13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 GPR22Q99680 433 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 EQTNQ9NQ60 294 aa13.01□□□□□ -0.33
PRPF38A-201ENST00000257181 PRSS38A1L453 326 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 NRP2O60462 931 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 CSNK2BP67870 215 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 IFI44LQ53G44 452 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 ASTLQ6HA08 431 aaPredicted RBP13□□□□□ -0.33
PRPF38A-201ENST00000257181 DNAJC14Q6Y2X3 702 aaPredicted RBP13□□□□□ -0.33
PRPF38A-201ENST00000257181 OR5P2Q8WZ92 322 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 PTCHD1Q96NR3 888 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 IKZF4Q9H2S9 585 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 GPN2Q9H9Y4 310 aaPredicted RBP13□□□□□ -0.33
PRPF38A-201ENST00000257181 DDX60LQ5H9U9 1706 aaKnown RBP13□□□□□ -0.33
PRPF38A-201ENST00000257181 PDHA1P08559 390 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 TTKP33981 857 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 IRAK1P51617 712 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 KMT5CQ86Y97 462 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 TANKQ92844 425 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 MTERF3Q96E29 417 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 TSSK3Q96PN8 268 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 MAP3K3Q99759 626 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 SERHL2Q9H4I8 314 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 GAREM1Q9H706 876 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 SERHLQ9NQF3 203 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 ZC4H2Q9NQZ6 224 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 A8MVJ9 347 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 FADS2P1A8MWK0 482 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 FEN1P39748 380 aaKnown RBP13□□□□□ -0.33
PRPF38A-201ENST00000257181 STK19P49842 368 aaPredicted RBP13□□□□□ -0.33
PRPF38A-201ENST00000257181 C2orf73Q8N5S3 287 aaPredicted RBP13□□□□□ -0.33
PRPF38A-201ENST00000257181 NAT8LQ8N9F0 302 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 SLC47A1Q96FL8 570 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 HPF1Q9NWY4 346 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 ELOVL7A1L3X0 281 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 FAM159BA6NKW6 160 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 C5orf67F2Z3F1 127 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 C16orf87Q6PH81 154 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 ENPP6Q6UWR7 440 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 ZADH2Q8N4Q0 377 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 FAM117AQ9C073 453 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 RAB9BQ9NP90 201 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 AGPAT4Q9NRZ5 378 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 ZNF451Q9Y4E5 1061 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 V9GYQ6 96 aa13□□□□□ -0.33
PRPF38A-201ENST00000257181 BAZ2BQ9UIF8 2168 aaKnown RBP12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 A8MUI8 341 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 SAGP10523 405 aaPredicted RBP12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 ARG2P78540 354 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 BST1Q10588 318 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 GARNL3Q5VVW2 1013 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 RPL13AP3Q6NVV1 102 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 SCD5Q86SK9 330 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 APCDD1Q8J025 514 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 SVOPLQ8N434 492 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 TMEM178AQ8NBL3 297 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 GPR150Q8NGU9 434 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 TSPEARQ8WU66 669 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 ASB12Q8WXK4 309 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 CNBD2Q96M20 576 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 HCFC1R1Q9NWW0 138 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 FBXO4Q9UKT5 387 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 NPIPA5E9PKD4 350 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 LDB2O43679 373 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 PPM1BO75688 479 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 FABP3P05413 133 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 LYNP07948 512 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 CPA2P48052 419 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 TRA2AQ13595 282 aaKnown RBP eCLIP12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 OPN5Q6U736 354 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 SYT13Q7L8C5 426 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 NET1Q7Z628 596 aaPredicted RBP12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 PRSS58Q8IYP2 241 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 OR2L2Q8NH16 312 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 PAAF1Q9BRP4 392 aa12.99□□□□□ -0.33
PRPF38A-201ENST00000257181 IL21RQ9HBE5 538 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms