RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ASIC5Q9NY37 505 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 GMPR2Q9P2T1 348 aaKnown RBP18.2■□□□□ 0.5
TRIM47-201ENST00000254816 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.2■□□□□ 0.5
TRIM47-201ENST00000254816 FXYD1O00168 92 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 EEDO75530 441 aaKnown RBP18.19■□□□□ 0.5
TRIM47-201ENST00000254816 MTHFD1P11586 935 aaKnown RBP18.19■□□□□ 0.5
TRIM47-201ENST00000254816 SDC1P18827 310 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 PEX19P40855 299 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 FOXB2Q5VYV0 432 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 NOXRED1Q6NXP6 359 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 ICA1LQ8NDH6 482 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 TSPEARQ8WU66 669 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 SMPDL3AQ92484 453 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 EGLN2Q96KS0 407 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 LRGUKQ96M69 825 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 EFCAB11Q9BUY7 163 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 EML5Q05BV3 1969 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 LRATO95237 230 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 RABIFP47224 123 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 SLC7A2P52569 658 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 MED21Q13503 144 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 NFYCQ13952 458 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 C17orf64Q86WR6 236 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 FAM20CQ8IXL6 584 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 GPR156Q8NFN8 814 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 GFM2Q969S9 779 aaKnown RBP18.19■□□□□ 0.5
TRIM47-201ENST00000254816 LRRC58Q96CX6 371 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 PKP2Q99959 881 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 HAUS8Q9BT25 410 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 SPAG4Q9NPE6 437 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 RIMS3Q9UJD0 308 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 LEF1Q9UJU2 399 aaPredicted RBP18.19■□□□□ 0.5
TRIM47-201ENST00000254816 ICKQ9UPZ9 632 aa18.19■□□□□ 0.5
TRIM47-201ENST00000254816 TNFRSF10CO14798 259 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 ZNF217O75362 1048 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 HSD17B2P37059 387 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 RAB28P51157 221 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 FAM174BQ3ZCQ3 159 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 PAGE2BQ5JRK9 111 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 NRROSQ86YC3 692 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 LAS2Q8IYD9 372 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 PHACTR4Q8IZ21 702 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 SLC6A18Q96N87 628 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 ORAI3Q9BRQ5 295 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 GPATCH1Q9BRR8 931 aaKnown RBP18.18■□□□□ 0.5
TRIM47-201ENST00000254816 EHD1Q9H4M9 534 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 KLF15Q9UIH9 416 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 A0A1W2PPC4 97 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 PRORSD1PA6NEY8 169 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 NPIPB8E9PQR5 432 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 SAP18O00422 153 aaKnown RBP18.18■□□□□ 0.5
TRIM47-201ENST00000254816 KIF1CO43896 1103 aaKnown RBP18.18■□□□□ 0.5
TRIM47-201ENST00000254816 PEX1O43933 1283 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 TGFB1P01137 390 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 THEGLP0DJG4 465 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 ZNF33BQ06732 778 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 HIST2H2ACQ16777 129 aaPredicted RBP18.18■□□□□ 0.5
TRIM47-201ENST00000254816 SPANXN4Q5MJ08 99 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 HIST2H2AA3Q6FI13 130 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 GPR153Q6NV75 609 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 ZFP1Q6P2D0 407 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 RAB42Q8N4Z0 105 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 DNAJB14Q8TBM8 379 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 ZBTB18Q99592 522 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 MVB12BQ9H7P6 319 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 BRF2Q9HAW0 419 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 SLC24A3Q9HC58 644 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 TMEM181Q9P2C4 612 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 ZNF624Q9P2J8 865 aaPredicted RBP18.18■□□□□ 0.5
TRIM47-201ENST00000254816 BCAP29Q9UHQ4 241 aa18.18■□□□□ 0.5
TRIM47-201ENST00000254816 FEZF1A0PJY2 475 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 ZNF839A8K0R7 811 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 H7BY64 318 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 AXIN1O15169 862 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 DNAJA2O60884 412 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 PKLRP30613 574 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 FOLH1Q04609 750 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 RBBP5Q15291 538 aaKnown RBP18.17■□□□□ 0.5
TRIM47-201ENST00000254816 COQ5Q5HYK3 327 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 ABRAXAS1Q6UWZ7 409 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 FAM129CQ86XR2 697 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 C1orf52Q8N6N3 182 aaKnown RBP18.17■□□□□ 0.5
TRIM47-201ENST00000254816 REPS1Q96D71 796 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 ASB9Q96DX5 294 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 PRAP1Q96NZ9 151 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 CLMPQ9H6B4 373 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 GID8Q9NWU2 228 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 DMTF1Q9Y222 760 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 TMED5Q9Y3A6 229 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 ABCA7Q8IZY2 2146 aa18.17■□□□□ 0.5
TRIM47-201ENST00000254816 DCNP07585 359 aaKnown RBP18.16■□□□□ 0.5
TRIM47-201ENST00000254816 PRPS2P11908 318 aa18.16■□□□□ 0.5
TRIM47-201ENST00000254816 MTAPQ13126 283 aa18.16■□□□□ 0.5
TRIM47-201ENST00000254816 CDC26Q8NHZ8 85 aa18.16■□□□□ 0.5
TRIM47-201ENST00000254816 NELL2Q99435 816 aa18.16■□□□□ 0.5
TRIM47-201ENST00000254816 OR51B5Q9H339 312 aa18.16■□□□□ 0.5
TRIM47-201ENST00000254816 DMRT3Q9NQL9 472 aa18.16■□□□□ 0.5
TRIM47-201ENST00000254816 AASDHPPTQ9NRN7 309 aa18.16■□□□□ 0.5
TRIM47-201ENST00000254816 TMEM45AQ9NWC5 275 aa18.16■□□□□ 0.5
TRIM47-201ENST00000254816 PRSS51A0A1B0GVH4 220 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms