RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 C9orf43Q8TAL5 461 aaPredicted RBP12.18□□□□□ -0.46
VPREB3-201ENST00000248948 SLC5A11Q8WWX8 675 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 UBXN10Q96LJ8 280 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 PRAP1Q96NZ9 151 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 EGFL8Q99944 293 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 CDC14AQ9UNH5 594 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 SH2B3Q9UQQ2 575 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 PTRH2Q9Y3E5 179 aaKnown RBP12.18□□□□□ -0.46
VPREB3-201ENST00000248948 ZNF462Q96JM2 2506 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 MED13Q9UHV7 2174 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 IGLV3-12A0A075B6K2 115 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 MKRN2OSH3BPM6 223 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 P2RX6O15547 441 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 CNOT3O75175 753 aaKnown RBP12.17□□□□□ -0.46
VPREB3-201ENST00000248948 IGHEP01854 428 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 PRB1P04280 392 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 SLC35G6P0C7Q6 338 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 SLC35E2BP0CK96 405 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 CCDC166P0CW27 439 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 NPPBP16860 134 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 SLC6A12P48065 614 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 CSRP3P50461 194 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 CCR8P51685 355 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 RRADP55042 308 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 FAM53BQ14153 422 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 SSPNQ14714 243 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 TGFBIQ15582 683 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 NDUFA9Q16795 377 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 HKDC1Q2TB90 917 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 MLIPQ5VWP3 458 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 MED25Q71SY5 747 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 TAOK1Q7L7X3 1001 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 VN1R4Q7Z5H5 301 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 MRGPREQ86SM8 312 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 TBC1D1Q86TI0 1168 aaPredicted RBP12.17□□□□□ -0.46
VPREB3-201ENST00000248948 IFT20Q8IY31 132 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 TBC1D19Q8N5T2 526 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 TMEM102Q8N9M5 508 aaPredicted RBP12.17□□□□□ -0.46
VPREB3-201ENST00000248948 PDPRQ8NCN5 879 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 OR4K1Q8NGD4 311 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 IFT81Q8WYA0 676 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 KIAA1191Q96A73 305 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 ALKBH8Q96BT7 664 aaKnown RBP12.17□□□□□ -0.46
VPREB3-201ENST00000248948 PYCR2Q96C36 320 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 OR4K3Q96R72 315 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 SPSB2Q99619 263 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 DRC3Q9H069 523 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 SLC25A18Q9H1K4 315 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 CNOT10Q9H9A5 744 aaKnown RBP12.17□□□□□ -0.46
VPREB3-201ENST00000248948 PELI2Q9HAT8 420 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 ZNF304Q9HCX3 659 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 DYRK1BQ9Y463 629 aa12.17□□□□□ -0.46
VPREB3-201ENST00000248948 A0A087X1B8 175 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 TRBC2A0A5B9 178 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 FAM155BO75949 473 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 MED26O95402 600 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 ACSL3O95573 720 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 UMODP07911 640 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 ABHD2P08910 425 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 FBLP22087 321 aaKnown RBP12.16□□□□□ -0.46
VPREB3-201ENST00000248948 SERPINB8P50452 374 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 REEP5Q00765 189 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 CSHL1Q14406 222 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 NKG7Q16617 165 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 RAPH1Q70E73 1250 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 CMC1Q7Z7K0 106 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 ASPGQ86U10 573 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 THOC6Q86W42 341 aaKnown RBP12.16□□□□□ -0.46
VPREB3-201ENST00000248948 PLD3Q8IV08 490 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 MFSD9Q8NBP5 474 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 CAMKVQ8NCB2 501 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 NEIL2Q969S2 332 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 PTERQ96BW5 349 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 RHBDF1Q96CC6 855 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 L2HGDHQ9H9P8 463 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 C14orf105Q9NVL8 296 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 GPRC5BQ9NZH0 403 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 CTSFQ9UBX1 484 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 ZNF282Q9UDV7 671 aaPredicted RBP12.16□□□□□ -0.46
VPREB3-201ENST00000248948 TLK1Q9UKI8 766 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 PCDHGA9Q9Y5G4 932 aaKnown RBP12.16□□□□□ -0.46
VPREB3-201ENST00000248948 KCNE2Q9Y6J6 123 aa12.16□□□□□ -0.46
VPREB3-201ENST00000248948 ARGFXA6NJG6 315 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 VSTM2BA6NLU5 285 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 H0YIG0 161 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 KERAO60938 352 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 WDR47O94967 919 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 NSA2O95478 260 aaKnown RBP12.15□□□□□ -0.46
VPREB3-201ENST00000248948 S100BP04271 92 aaPredicted RBP12.15□□□□□ -0.46
VPREB3-201ENST00000248948 INHBAP08476 426 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 LTA4HP09960 611 aaKnown RBP12.15□□□□□ -0.46
VPREB3-201ENST00000248948 GNAZP19086 355 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 MMP11P24347 488 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 GSTM2P28161 218 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 OTX2P32243 289 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 GGT5P36269 586 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 BCL6P41182 706 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 ATP1A4Q13733 1029 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 LACTB2Q53H82 288 aaPredicted RBP12.15□□□□□ -0.46
VPREB3-201ENST00000248948 FAM69BQ5VUD6 431 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms