RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 TCAF1Q9Y4C2 921 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 MAD1L1Q9Y6D9 718 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 NF1P21359 2839 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 LOC105369274A0A096LPK9 316 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 LOC102723532A0A0G2JNH3 316 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 MAGEB16A2A368 324 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 E7ESA3 106 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 KDM1AO60341 852 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 SLC19A2O60779 497 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 CTSVO60911 334 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 AVILO75366 819 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 ONECUT2O95948 504 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 CRYABP02511 175 aaKnown RBP13.12□□□□□ -0.31
DDX39A-201ENST00000242776 ITGAMP11215 1152 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 CD9P21926 228 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 FBLP22087 321 aaKnown RBP13.12□□□□□ -0.31
DDX39A-201ENST00000242776 CXCR2P25025 360 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 ECHS1P30084 290 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 SSTR2P30874 369 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 SOX11P35716 441 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 EMP2P54851 167 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 VSNL1P62760 191 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 HSPA14Q0VDF9 509 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 PDIA2Q13087 525 aaKnown RBP13.12□□□□□ -0.31
DDX39A-201ENST00000242776 CBLBQ13191 982 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 SLMAPQ14BN4 828 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 FAM214AQ32MH5 1076 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 TCTE1Q5JU00 501 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 XKRXQ6PP77 449 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 ZBED8Q8IZ13 594 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 OR4N4Q8N0Y3 316 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 SUN3Q8TAQ9 357 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 HAS2Q92819 552 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 PEX13Q92968 403 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 MTFMTQ96DP5 389 aaKnown RBP13.12□□□□□ -0.31
DDX39A-201ENST00000242776 PARD6BQ9BYG5 372 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 SAYSD1Q9NPB0 183 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 INTS7Q9NVH2 962 aaKnown RBP13.12□□□□□ -0.31
DDX39A-201ENST00000242776 ABI3Q9P2A4 366 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 TSR3Q9UJK0 312 aaKnown RBP13.12□□□□□ -0.31
DDX39A-201ENST00000242776 SLC39A10Q9ULF5 831 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 SOX13Q9UN79 622 aa13.12□□□□□ -0.31
DDX39A-201ENST00000242776 IQCF5A8MTL0 148 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 CTIFO43310 598 aaKnown RBP13.11□□□□□ -0.31
DDX39A-201ENST00000242776 TTC4O95801 387 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 OR56A5P0C7T3 313 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 PAMP19021 973 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 TLE4Q04727 773 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 ZNF33BQ06732 778 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 TESK1Q15569 626 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 INAQ16352 499 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 CCDC38Q502W7 563 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 ATG9BQ674R7 924 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 FCRLBQ6BAA4 426 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 NEK10Q6ZWH5 1172 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 LKAAEAR1Q8TD35 194 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 STYXQ8WUJ0 223 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 CHTF18Q8WVB6 975 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 SIGLEC10Q96LC7 697 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 C19orf43Q9BQ61 176 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 TRPC4Q9UBN4 977 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 RAB21Q9UL25 225 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 RIMKLBQ9ULI2 386 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 CHMP2BQ9UQN3 213 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 MTORP42345 2549 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 GTF3C1Q12789 2109 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 SCN2AQ99250 2005 aa13.11□□□□□ -0.31
DDX39A-201ENST00000242776 IGHV1-45A0A0A0MS14 117 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 FAM237BA0A1B0GVD1 139 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 A8MUI8 341 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 IDSB3KWA1 339 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 PRAMEF2O60811 474 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 ERLIN1O75477 346 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 NADKO95544 446 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-201ENST00000242776 SERPINA7P05543 415 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 HEXBP07686 556 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 GSTM1P09488 218 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 ERVK-10P10266 1014 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 PGAM1P18669 254 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 CCR7P32248 378 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 BDKRB1P46663 353 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 SMSP52788 366 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 CRADDP78560 199 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 GSTM4Q03013 218 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 TSTD2Q5T7W7 516 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 YOD1Q5VVQ6 348 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-201ENST00000242776 C3P1Q6ZMU1 363 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 KRT222Q8N1A0 295 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 MPP5Q8N3R9 675 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 FBXO36Q8NEA4 188 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 PYROXD1Q8WU10 500 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 SLC22A18Q96BI1 424 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 MAGED4Q96JG8 741 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 CABS1Q96KC9 395 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 PWWP2AQ96N64 755 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 EBNA1BP2Q99848 306 aaKnown RBP13.1□□□□□ -0.31
DDX39A-201ENST00000242776 MENTQ9BUN1 341 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 KIFC1Q9BW19 673 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 KLHL1Q9NR64 748 aa13.1□□□□□ -0.31
DDX39A-201ENST00000242776 IL1RAPL1Q9NZN1 696 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms