RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 SOCS5O75159 536 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 SNNO75324 88 aaPredicted RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 PFKMP08237 780 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 HOXA11P31270 313 aaPredicted RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 DUOXA1Q1HG43 343 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 OVCA2Q8WZ82 227 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 TRIB2Q92519 343 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 HPS1Q92902 700 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 ARMC5Q96C12 935 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 RNF31Q96EP0 1072 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 IL4I1Q96RQ9 567 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 PKP4Q99569 1192 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 SMG9Q9H0W8 520 aaKnown RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 SLC35C2Q9NQQ7 365 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 ADAMTSL1Q8N6G6 1762 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 CDK5RAP2Q96SN8 1893 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 TOR1BO14657 336 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 CCNKO75909 580 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 CYP11A1P05108 521 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 RPLP0P05388 317 aaKnown RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 AHCYP23526 432 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 FMO3P31513 532 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 DGKEP52429 567 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 DNAJB13P59910 316 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 GMFBP60983 142 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 NIPAL4Q0D2K0 466 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 SYT16Q17RD7 645 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 TMEM44Q2T9K0 475 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 TMEM135Q86UB9 458 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 RAB43Q86YS6 212 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 TMEM130Q8N3G9 435 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 TSEN15Q8WW01 171 aaKnown RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 IRF7Q92985 503 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 SCAMP4Q969E2 229 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 FCRL3Q96P31 734 aaPredicted RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 TUBGCP5Q96RT8 1024 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 PAAF1Q9BRP4 392 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 TRPV5Q9NQA5 729 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 FAM120CQ9NX05 1096 aaKnown RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 KCNK6Q9Y257 313 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 SMCHD1A6NHR9 2005 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 TRBC2A0A5B9 178 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 LDB2O43679 373 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 REM1O75628 298 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 BCAS2O75934 225 aaPredicted RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 LDOC1O95751 146 aaPredicted RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 HMGN1P05114 100 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 JUNP05412 331 aaKnown RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 IL12BP29460 328 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 CLCN7P51798 805 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 DIO3P55073 304 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 GPRIN1Q7Z2K8 1008 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 ZNF598Q86UK7 904 aaKnown RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 GEMIN6Q8WXD5 167 aaKnown RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 IGSF8Q969P0 613 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 UTP4Q969X6 686 aaKnown RBP11.19□□□□□ -0.62
NOD1-201ENST00000222823 PHF12Q96QT6 1004 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 POPDC3Q9HBV1 291 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 SNX7Q9UNH6 387 aa11.19□□□□□ -0.62
NOD1-201ENST00000222823 HLA-EP13747 358 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 LEPRP48357 1165 aaKnown RBP11.18□□□□□ -0.62
NOD1-201ENST00000222823 GPR68Q15743 365 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 C6orf136Q5SQH8 315 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 ZNF776Q68DI1 518 aaPredicted RBP11.18□□□□□ -0.62
NOD1-201ENST00000222823 TLDC1Q6P9B6 456 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 AKAP14Q86UN6 197 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 TICAM1Q8IUC6 712 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 CAMKVQ8NCB2 501 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 POF1BQ8WVV4 589 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 MRGPRX2Q96LB1 330 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 CD244Q9BZW8 370 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 LRRC37AA6NMS7 1700 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 QSER1Q2KHR3 1735 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 GNB5O14775 395 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 NDUFS4O43181 175 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 PREPP48147 710 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 BCAP31P51572 246 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 TAS2R50P59544 299 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 NFATC2Q13469 925 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 AMZ1Q400G9 498 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 CMPK2Q5EBM0 449 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 TSTD1Q8NFU3 115 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 KBTBD7Q8WVZ9 684 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 PRR11Q96HE9 360 aaPredicted RBP11.18□□□□□ -0.62
NOD1-201ENST00000222823 CREG1O75629 220 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 GBAP04062 536 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 CD2P06729 351 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 H1F0P07305 194 aaKnown RBP11.18□□□□□ -0.62
NOD1-201ENST00000222823 C8BP07358 591 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 CD36P16671 472 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 AGTR2P50052 363 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 RAB8AP61006 207 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 TMEM115Q12893 351 aaPredicted RBP11.18□□□□□ -0.62
NOD1-201ENST00000222823 NPTX1Q15818 432 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 C5orf22Q49AR2 442 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 CWF19L1Q69YN2 538 aaKnown RBP11.18□□□□□ -0.62
NOD1-201ENST00000222823 ALKBH2Q6NS38 261 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 CEACAM20Q6UY09 585 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 OR6K6Q8NGW6 343 aa11.18□□□□□ -0.62
NOD1-201ENST00000222823 DPYSL5Q9BPU6 564 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms