RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 CEACAM20Q6UY09 585 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 RPS27LQ71UM5 84 aaKnown RBP12.65□□□□□ -0.38
GTF3A-209ENST00000640289 LRRC70Q7Z2Q7 622 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 HDXQ7Z353 690 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 CROCCP2Q86T23 111 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 MCATQ8IVS2 390 aaKnown RBP12.65□□□□□ -0.38
GTF3A-209ENST00000640289 OR4N4Q8N0Y3 316 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 LSMEM2Q8N112 164 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 TEX9Q8N6V9 391 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 ZNF740Q8NDX6 193 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 N4BP2L2Q92802 583 aaPredicted RBP12.65□□□□□ -0.38
GTF3A-209ENST00000640289 MOCOSQ96EN8 888 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 PGM2Q96G03 612 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 ZFYVE21Q9BQ24 234 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 DDA1Q9BW61 102 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 SPRTNQ9H040 489 aaPredicted RBP12.65□□□□□ -0.38
GTF3A-209ENST00000640289 FANCEQ9HB96 536 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 TMBIM4Q9HC24 238 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 STARD5Q9NSY2 213 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 SLC17A7Q9P2U7 560 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 PLCL2Q9UPR0 1127 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 SPTBN2O15020 2390 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 H3BMH7 237 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 STX16-NPEPL1H3BU86 382 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 STX16O14662 325 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 NVLO15381 856 aaKnown RBP12.64□□□□□ -0.39
GTF3A-209ENST00000640289 TYROBPO43914 113 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 LCMT2O60294 686 aaKnown RBP12.64□□□□□ -0.39
GTF3A-209ENST00000640289 STATHP02808 62 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 MYZAPP0CAP1 466 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 EZRP15311 586 aaKnown RBP12.64□□□□□ -0.39
GTF3A-209ENST00000640289 ZNF28P17035 718 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 GNAZP19086 355 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 ATP5F1P24539 256 aaPredicted RBP12.64□□□□□ -0.39
GTF3A-209ENST00000640289 HRH2P25021 359 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 CCR8P51685 355 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 VSX2P58304 361 aaPredicted RBP12.64□□□□□ -0.39
GTF3A-209ENST00000640289 IL11RAQ14626 422 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.64□□□□□ -0.39
GTF3A-209ENST00000640289 TMEM164Q5U3C3 297 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 NXPE4Q6UWF7 544 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 SLCO4C1Q6ZQN7 724 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 GOLGA7Q7Z5G4 137 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 ZFAND4Q86XD8 727 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 CCDC63Q8NA47 563 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 ARMC2Q8NEN0 867 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 ABHD11Q8NFV4 315 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 OR4K1Q8NGD4 311 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 TCP10LQ8TDR4 215 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 NSUN5Q96P11 429 aaKnown RBP12.64□□□□□ -0.39
GTF3A-209ENST00000640289 FAM111AQ96PZ2 611 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 OR2A5Q96R48 311 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 SELENOSQ9BQE4 189 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 ASPSCR1Q9BZE9 553 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 IQCGQ9H095 443 aaKnown RBP12.64□□□□□ -0.39
GTF3A-209ENST00000640289 PELI2Q9HAT8 420 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 THSD1Q9NS62 852 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 GPRC5BQ9NZH0 403 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 SENP1Q9P0U3 644 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 PCTPQ9UKL6 214 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 TMCO1Q9UM00 188 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 PLLPQ9Y342 182 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 PCDHGA7Q9Y5G6 932 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 PCDHGA3Q9Y5H0 932 aa12.64□□□□□ -0.39
GTF3A-209ENST00000640289 TNPO3Q9Y5L0 923 aaKnown RBP12.64□□□□□ -0.39
GTF3A-209ENST00000640289 TEX51A0A1B0GUA7 166 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 H0YGG7 62 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 E2F3O00716 465 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 CLGNO14967 610 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 SCRG1O75711 98 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 SASH3O75995 380 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 OR2B3O76000 313 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 KIAA0754O94854 1291 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 NTRK1P04629 796 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 EIF2S1P05198 315 aaKnown RBP12.63□□□□□ -0.39
GTF3A-209ENST00000640289 RPS17P08708 135 aaKnown RBP12.63□□□□□ -0.39
GTF3A-209ENST00000640289 C1GALT1C1LP0DN25 315 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 MYL2P10916 166 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 EPB42P16452 691 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 BCL6P41182 706 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 ITGA1P56199 1179 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 ARF3P61204 181 aaPredicted RBP12.63□□□□□ -0.39
GTF3A-209ENST00000640289 NFKB2Q00653 900 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 REEP5Q00765 189 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 CHIT1Q13231 466 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 GTF2H2Q13888 395 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 DOC2AQ14183 400 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 SLBPQ14493 270 aaKnown RBP eCLIP12.63□□□□□ -0.39
GTF3A-209ENST00000640289 KIF26BQ2KJY2 2108 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 TBC1D25Q3MII6 688 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 XKR6Q5GH73 641 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 ATG9BQ674R7 924 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 GTF2H2CQ6P1K8 395 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 CYB5D1Q6P9G0 228 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 UNQ6494/PRO21346Q6UXR6 183 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 ZYG11AQ6WRX3 759 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 TMEM126BQ8IUX1 230 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 ZNF578Q96N58 590 aaPredicted RBP12.63□□□□□ -0.39
GTF3A-209ENST00000640289 TMEM237Q96Q45 408 aa12.63□□□□□ -0.39
GTF3A-209ENST00000640289 TEFMQ96QE5 360 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms