RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 NTRK1P04629 796 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 GDF5P43026 501 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 HSPA7P48741 367 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 ATP1A2P50993 1020 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 CSNK1G2P78368 415 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 IFFO1Q0D2I5 559 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 TGIF1Q15583 401 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 ST3GAL2Q16842 350 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 TCTE1Q5JU00 501 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 FRMPD2BQ6IN97 320 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 TLDC1Q6P9B6 456 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 LRRC69Q6ZNQ3 347 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 CYP4X1Q8N118 509 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 ESX1Q8N693 406 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 GALNT6Q8NCL4 622 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 UBTD2Q8WUN7 234 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 NKD1Q969G9 470 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 NEIL2Q969S2 332 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 SPRTNQ9H040 489 aaPredicted RBP19.44■□□□□ 0.7
PTCD3-220ENST00000627371 ACTR5Q9H9F9 607 aaPredicted RBP19.44■□□□□ 0.7
PTCD3-220ENST00000627371 IRAK4Q9NWZ3 460 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 XPR1Q9UBH6 696 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 DYRK1BQ9Y463 629 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 KCNE2Q9Y6J6 123 aa19.44■□□□□ 0.7
PTCD3-220ENST00000627371 TEX51A0A1B0GUA7 166 aa19.43■□□□□ 0.7
PTCD3-220ENST00000627371 SRRM3A6NNA2 597 aaPredicted RBP19.43■□□□□ 0.7
PTCD3-220ENST00000627371 MAP2K7O14733 419 aa19.43■□□□□ 0.7
PTCD3-220ENST00000627371 KLK10O43240 276 aa19.43■□□□□ 0.7
PTCD3-220ENST00000627371 ZNF749O43361 778 aa19.43■□□□□ 0.7
PTCD3-220ENST00000627371 KLK8O60259 260 aa19.43■□□□□ 0.7
PTCD3-220ENST00000627371 STK16O75716 305 aa19.43■□□□□ 0.7
PTCD3-220ENST00000627371 PYGBP11216 843 aa19.43■□□□□ 0.7
PTCD3-220ENST00000627371 KRT15P19012 456 aa19.43■□□□□ 0.7
PTCD3-220ENST00000627371 CCR8P51685 355 aa19.43■□□□□ 0.7
PTCD3-220ENST00000627371 FBXO48Q5FWF7 155 aa19.43■□□□□ 0.7
PTCD3-220ENST00000627371 C6orf15Q6UXA7 325 aaPredicted RBP19.43■□□□□ 0.7
PTCD3-220ENST00000627371 SPACA3Q8IXA5 215 aa19.43■□□□□ 0.7
PTCD3-220ENST00000627371 CACNA2D3Q8IZS8 1091 aa19.43■□□□□ 0.7
PTCD3-220ENST00000627371 OR4K1Q8NGD4 311 aa19.43■□□□□ 0.7
PTCD3-220ENST00000627371 SCYL1Q96KG9 808 aa19.43■□□□□ 0.7
PTCD3-220ENST00000627371 LRFN5Q96NI6 719 aa19.43■□□□□ 0.7
PTCD3-220ENST00000627371 OR2A5Q96R48 311 aa19.43■□□□□ 0.7
PTCD3-220ENST00000627371 ROPN1BQ9BZX4 212 aaPredicted RBP19.43■□□□□ 0.7
PTCD3-220ENST00000627371 ROPN1Q9HAT0 212 aaPredicted RBP19.43■□□□□ 0.7
PTCD3-220ENST00000627371 CFAP47Q6ZTR5 3102 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 LOC105369274A0A096LPK9 316 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 LOC102723532A0A0G2JNH3 316 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 A0A1W2PPM1 405 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 TLDC2A0PJX2 215 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 CCDC151A5D8V7 595 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 GOLGA8RI6L899 631 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 ERLIN1O75477 346 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 HBQ1P09105 142 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 GFAPP14136 432 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 VSX2P58304 361 aaPredicted RBP19.42■□□□□ 0.7
PTCD3-220ENST00000627371 RPS15AP62244 130 aaKnown RBP19.42■□□□□ 0.7
PTCD3-220ENST00000627371 CDC16Q13042 620 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 LRRC70Q7Z2Q7 622 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 OR4N4Q8N0Y3 316 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 IL22RA1Q8N6P7 574 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 ZNF655Q8N720 491 aaPredicted RBP19.42■□□□□ 0.7
PTCD3-220ENST00000627371 SLC38A9Q8NBW4 561 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 ESAMQ96AP7 390 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 CLIP3Q96DZ5 547 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 MRPL57Q9BQC6 102 aaKnown RBP19.42■□□□□ 0.7
PTCD3-220ENST00000627371 CD244Q9BZW8 370 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 SLC7A5P2Q9GIP4 190 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 MRPL46Q9H2W6 279 aaKnown RBP19.42■□□□□ 0.7
PTCD3-220ENST00000627371 SYNPO2LQ9H987 977 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 PELI2Q9HAT8 420 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 DNAJC11Q9NVH1 559 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 GPRC5BQ9NZH0 403 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 SRPK3Q9UPE1 567 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 PLAAQ9Y263 795 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 SSUH2Q9Y2M2 353 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 ASB1Q9Y576 335 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 ZZEF1O43149 2961 aa19.42■□□□□ 0.7
PTCD3-220ENST00000627371 FITM1A5D6W6 292 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 H0YGG7 62 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 TK2O00142 265 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 GSTA1P08263 222 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 GNAZP19086 355 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 RORAP35398 523 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 GRK3P35626 688 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 STAT5AP42229 794 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 GCGRP47871 477 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 AGTR2P50052 363 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 ALDH18A1P54886 795 aaKnown RBP19.41■□□□□ 0.7
PTCD3-220ENST00000627371 ARF3P61204 181 aaPredicted RBP19.41■□□□□ 0.7
PTCD3-220ENST00000627371 ABHD18Q0P651 414 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 GPS2Q13227 327 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 GRM7Q14831 915 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 SETDB1Q15047 1291 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 PFKFB4Q16877 469 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 WASHC2DQ5SRD0 308 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 CATSPEREQ5SY80 951 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 RHBDD2Q6NTF9 364 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 SH2D5Q6ZV89 423 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 TMPRSS11BQ86T26 416 aa19.41■□□□□ 0.7
PTCD3-220ENST00000627371 PLD3Q8IV08 490 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms