RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 RMI1Q9H9A7 625 aa21.29■■□□□ 1
PNKP-220ENST00000627232 FAM120CQ9NX05 1096 aaKnown RBP21.29■■□□□ 1
PNKP-220ENST00000627232 CLDND1Q9NY35 253 aa21.29■■□□□ 1
PNKP-220ENST00000627232 ACSL5Q9ULC5 683 aa21.29■■□□□ 1
PNKP-220ENST00000627232 SCML1Q9UN30 329 aa21.29■■□□□ 1
PNKP-220ENST00000627232 PIPSLA2A3N6 862 aa21.29■■□□□ 1
PNKP-220ENST00000627232 FAM220BPB1ANY3 271 aa21.29■■□□□ 1
PNKP-220ENST00000627232 DNTTP04053 509 aa21.29■■□□□ 1
PNKP-220ENST00000627232 MYCLP1P12525 358 aaPredicted RBP21.29■■□□□ 1
PNKP-220ENST00000627232 CDH1P12830 882 aa21.29■■□□□ 1
PNKP-220ENST00000627232 PTPN6P29350 595 aa21.29■■□□□ 1
PNKP-220ENST00000627232 CTHP32929 405 aa21.29■■□□□ 1
PNKP-220ENST00000627232 RAE1P78406 368 aaKnown RBP21.29■■□□□ 1
PNKP-220ENST00000627232 PRKCQQ04759 706 aa21.29■■□□□ 1
PNKP-220ENST00000627232 TMEM259Q4ZIN3 620 aa21.29■■□□□ 1
PNKP-220ENST00000627232 PRAMEF14Q5SWL7 426 aa21.29■■□□□ 1
PNKP-220ENST00000627232 CATSPEREQ5SY80 951 aa21.29■■□□□ 1
PNKP-220ENST00000627232 PRAMEF13Q5VWM6 474 aa21.29■■□□□ 1
PNKP-220ENST00000627232 CALHM3Q86XJ0 350 aa21.29■■□□□ 1
PNKP-220ENST00000627232 OR5AR1Q8NGP9 310 aa21.29■■□□□ 1
PNKP-220ENST00000627232 OR5K2Q8NHB8 316 aa21.29■■□□□ 1
PNKP-220ENST00000627232 GANCQ8TET4 914 aa21.29■■□□□ 1
PNKP-220ENST00000627232 GEMIN8Q9NWZ8 242 aaKnown RBP21.29■■□□□ 1
PNKP-220ENST00000627232 SPATA7Q9P0W8 599 aa21.29■■□□□ 1
PNKP-220ENST00000627232 PDP2Q9P2J9 529 aa21.29■■□□□ 1
PNKP-220ENST00000627232 SH2B3Q9UQQ2 575 aa21.29■■□□□ 1
PNKP-220ENST00000627232 MYO9BQ13459 2157 aa21.28■■□□□ 1
PNKP-220ENST00000627232 EIF4E1BA6NMX2 242 aaKnown RBP21.28■■□□□ 1
PNKP-220ENST00000627232 KCNJ13O60928 360 aa21.28■■□□□ 1
PNKP-220ENST00000627232 SCELO95171 688 aa21.28■■□□□ 1
PNKP-220ENST00000627232 LRATO95237 230 aa21.28■■□□□ 1
PNKP-220ENST00000627232 ETHE1O95571 254 aa21.28■■□□□ 1
PNKP-220ENST00000627232 PAK4O96013 591 aaPredicted RBP21.28■■□□□ 1
PNKP-220ENST00000627232 RPS13P62277 151 aaKnown RBP21.28■■□□□ 1
PNKP-220ENST00000627232 PHEXP78562 749 aa21.28■■□□□ 1
PNKP-220ENST00000627232 TSTA3Q13630 321 aaPredicted RBP21.28■■□□□ 1
PNKP-220ENST00000627232 UGT8Q16880 541 aa21.28■■□□□ 1
PNKP-220ENST00000627232 DUOXA1Q1HG43 343 aa21.28■■□□□ 1
PNKP-220ENST00000627232 OR4F3Q6IEY1 312 aa21.28■■□□□ 1
PNKP-220ENST00000627232 GALNT18Q6P9A2 607 aa21.28■■□□□ 1
PNKP-220ENST00000627232 C1orf52Q8N6N3 182 aaKnown RBP21.28■■□□□ 1
PNKP-220ENST00000627232 OR10A6Q8NH74 314 aa21.28■■□□□ 1
PNKP-220ENST00000627232 FAM110BQ8TC76 370 aa21.28■■□□□ 1
PNKP-220ENST00000627232 POP5Q969H6 163 aaKnown RBP21.28■■□□□ 1
PNKP-220ENST00000627232 MKRN2Q9H000 416 aaKnown RBP21.28■■□□□ 1
PNKP-220ENST00000627232 IKZF5Q9H5V7 419 aa21.28■■□□□ 1
PNKP-220ENST00000627232 KAT8Q9H7Z6 458 aaKnown RBP21.28■■□□□ 1
PNKP-220ENST00000627232 TRPV5Q9NQA5 729 aa21.28■■□□□ 1
PNKP-220ENST00000627232 DLGAP2Q9P1A6 1054 aa21.28■■□□□ 1
PNKP-220ENST00000627232 INVSQ9Y283 1065 aa21.28■■□□□ 1
PNKP-220ENST00000627232 ELOVL7A1L3X0 281 aa21.27■■□□□ 1
PNKP-220ENST00000627232 GSTA4O15217 222 aa21.27■■□□□ 1
PNKP-220ENST00000627232 TIA1P31483 386 aaKnown RBP eCLIP21.27■■□□□ 1
PNKP-220ENST00000627232 LTBRP36941 435 aa21.27■■□□□ 1
PNKP-220ENST00000627232 PIK3CBP42338 1070 aa21.27■■□□□ 1
PNKP-220ENST00000627232 CYP2A13Q16696 494 aa21.27■■□□□ 1
PNKP-220ENST00000627232 GTDC1Q4AE62 458 aa21.27■■□□□ 1
PNKP-220ENST00000627232 DNAJC14Q6Y2X3 702 aaPredicted RBP21.27■■□□□ 1
PNKP-220ENST00000627232 ZBTB49Q6ZSB9 765 aa21.27■■□□□ 1
PNKP-220ENST00000627232 CAMKMTQ7Z624 323 aa21.27■■□□□ 1
PNKP-220ENST00000627232 MICU2Q8IYU8 434 aa21.27■■□□□ 1
PNKP-220ENST00000627232 IL17RCQ8NAC3 791 aa21.27■■□□□ 1
PNKP-220ENST00000627232 PHC3Q8NDX5 983 aa21.27■■□□□ 1
PNKP-220ENST00000627232 OR14C36Q8NHC7 312 aa21.27■■□□□ 1
PNKP-220ENST00000627232 TIMM29Q9BSF4 260 aa21.27■■□□□ 1
PNKP-220ENST00000627232 INPP5KQ9BT40 448 aa21.27■■□□□ 1
PNKP-220ENST00000627232 C9orf16Q9BUW7 83 aa21.27■■□□□ 1
PNKP-220ENST00000627232 OSBPL11Q9BXB4 747 aa21.27■■□□□ 1
PNKP-220ENST00000627232 SLC17A9Q9BYT1 436 aa21.27■■□□□ 1
PNKP-220ENST00000627232 PCBD2Q9H0N5 130 aa21.27■■□□□ 1
PNKP-220ENST00000627232 TRIT1Q9H3H1 467 aaKnown RBP21.27■■□□□ 1
PNKP-220ENST00000627232 DMRT3Q9NQL9 472 aa21.27■■□□□ 1
PNKP-220ENST00000627232 A0A1W2PQU0 124 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 RFXANKO14593 260 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 SCAMP2O15127 329 aaKnown RBP21.26■□□□□ 0.99
PNKP-220ENST00000627232 RNGTTO60942 597 aaKnown RBP21.26■□□□□ 0.99
PNKP-220ENST00000627232 ANXA4P09525 319 aaPredicted RBP21.26■□□□□ 0.99
PNKP-220ENST00000627232 SLC35G4P0C7Q5 338 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 C7P10643 843 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 COX7A2P14406 83 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 CCT8P50990 548 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 GZMMP51124 257 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 ABHD18Q0P651 414 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 ATP6AP1Q15904 470 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 THEMIS2Q5TEJ8 643 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 CAPRIN2Q6IMN6 1127 aaKnown RBP21.26■□□□□ 0.99
PNKP-220ENST00000627232 UGT2A3Q6UWM9 527 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 EP400NLQ6ZTU2 488 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 OR7A2PQ8NGA2 310 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 ASB12Q8WXK4 309 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 GFM2Q969S9 779 aaKnown RBP21.26■□□□□ 0.99
PNKP-220ENST00000627232 CIB1Q99828 191 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 REXO4Q9GZR2 422 aaKnown RBP21.26■□□□□ 0.99
PNKP-220ENST00000627232 PELI2Q9HAT8 420 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 PREBQ9HCU5 417 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 TM7SF3Q9NS93 570 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 SLC6A13Q9NSD5 602 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 OR1A2Q9Y585 309 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 NUMA1Q14980 2115 aa21.26■□□□□ 0.99
PNKP-220ENST00000627232 DOCK9Q9BZ29 2069 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms