RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 LCTLQ6UWM7 567 aa23.79■■□□□ 1.4
PMS1-220ENST00000618056 ZNF843Q8N446 348 aa23.79■■□□□ 1.4
PMS1-220ENST00000618056 OR56A3Q8NH54 315 aa23.79■■□□□ 1.4
PMS1-220ENST00000618056 ANKRD49Q8WVL7 239 aa23.79■■□□□ 1.4
PMS1-220ENST00000618056 OR2A5Q96R48 311 aa23.79■■□□□ 1.4
PMS1-220ENST00000618056 TSPYL1Q9H0U9 437 aa23.79■■□□□ 1.4
PMS1-220ENST00000618056 TMEM184CQ9NVA4 438 aa23.79■■□□□ 1.4
PMS1-220ENST00000618056 IFT80Q9P2H3 777 aaPredicted RBP23.79■■□□□ 1.4
PMS1-220ENST00000618056 GPN3Q9UHW5 284 aaPredicted RBP23.79■■□□□ 1.4
PMS1-220ENST00000618056 KLF7O75840 302 aaPredicted RBP23.78■■□□□ 1.4
PMS1-220ENST00000618056 ITGAXP20702 1163 aa23.78■■□□□ 1.4
PMS1-220ENST00000618056 SPRP35270 261 aaPredicted RBP23.78■■□□□ 1.4
PMS1-220ENST00000618056 PRTGQ2VWP7 1150 aa23.78■■□□□ 1.4
PMS1-220ENST00000618056 CAPN13Q6MZZ7 669 aaPredicted RBP23.78■■□□□ 1.4
PMS1-220ENST00000618056 MRPL14Q6P1L8 145 aaKnown RBP23.78■■□□□ 1.4
PMS1-220ENST00000618056 PPM1NQ8N819 430 aa23.78■■□□□ 1.4
PMS1-220ENST00000618056 CEP112Q8N8E3 955 aa23.78■■□□□ 1.4
PMS1-220ENST00000618056 SYNPO2LQ9H987 977 aa23.78■■□□□ 1.4
PMS1-220ENST00000618056 SLC22A11Q9NSA0 550 aa23.78■■□□□ 1.4
PMS1-220ENST00000618056 HYKKA2RU49 373 aa23.77■■□□□ 1.4
PMS1-220ENST00000618056 H7BY64 318 aa23.77■■□□□ 1.4
PMS1-220ENST00000618056 CDC7O00311 574 aa23.77■■□□□ 1.4
PMS1-220ENST00000618056 CDKL1Q00532 357 aa23.77■■□□□ 1.4
PMS1-220ENST00000618056 USP10Q14694 798 aaKnown RBP23.77■■□□□ 1.4
PMS1-220ENST00000618056 ZKSCAN8Q15776 578 aaPredicted RBP23.77■■□□□ 1.4
PMS1-220ENST00000618056 MLIPQ5VWP3 458 aa23.77■■□□□ 1.4
PMS1-220ENST00000618056 ADCK2Q7Z695 626 aa23.77■■□□□ 1.4
PMS1-220ENST00000618056 ADAMTSL2Q86TH1 951 aa23.77■■□□□ 1.4
PMS1-220ENST00000618056 FKBP10Q96AY3 582 aa23.77■■□□□ 1.4
PMS1-220ENST00000618056 PRAP1Q96NZ9 151 aa23.77■■□□□ 1.4
PMS1-220ENST00000618056 HAUS8Q9BT25 410 aa23.77■■□□□ 1.4
PMS1-220ENST00000618056 DERL2Q9GZP9 239 aa23.77■■□□□ 1.4
PMS1-220ENST00000618056 NDOR1Q9UHB4 597 aa23.77■■□□□ 1.4
PMS1-220ENST00000618056 MAN2B2Q9Y2E5 1009 aa23.77■■□□□ 1.4
PMS1-220ENST00000618056 NUP210LQ5VU65 1888 aa23.76■■□□□ 1.39
PMS1-220ENST00000618056 HAT1O14929 419 aa23.76■■□□□ 1.39
PMS1-220ENST00000618056 EIF2S1P05198 315 aaKnown RBP23.76■■□□□ 1.39
PMS1-220ENST00000618056 PIM1P11309 404 aaPredicted RBP23.76■■□□□ 1.39
PMS1-220ENST00000618056 NPPBP16860 134 aa23.76■■□□□ 1.39
PMS1-220ENST00000618056 STMN1P16949 149 aa23.76■■□□□ 1.39
PMS1-220ENST00000618056 C19orf57Q0VDD7 668 aa23.76■■□□□ 1.39
PMS1-220ENST00000618056 KCNAB2Q13303 367 aa23.76■■□□□ 1.39
PMS1-220ENST00000618056 C17orf64Q86WR6 236 aa23.76■■□□□ 1.39
PMS1-220ENST00000618056 APLFQ8IW19 511 aaPredicted RBP23.76■■□□□ 1.39
PMS1-220ENST00000618056 CAB39LQ9H9S4 337 aa23.76■■□□□ 1.39
PMS1-220ENST00000618056 SH2B3Q9UQQ2 575 aa23.76■■□□□ 1.39
PMS1-220ENST00000618056 NPEPPSL1A6NEC2 478 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 TXNDC9O14530 226 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 GUCA1CO95843 209 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 ALBP02768 609 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 ECHS1P30084 290 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 PMS2P54278 862 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 COL9A2Q14055 689 aaPredicted RBP23.75■■□□□ 1.39
PMS1-220ENST00000618056 SLC9A5Q14940 896 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 MUM1Q2TAK8 710 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 FAM69BQ5VUD6 431 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 CSNK1A1LQ8N752 337 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 OR2Y1Q8NGV0 311 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 RERGQ96A58 199 aaPredicted RBP23.75■■□□□ 1.39
PMS1-220ENST00000618056 FMO2Q99518 471 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 SLC26A1Q9H2B4 701 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 CTNNAL1Q9UBT7 734 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 OARD1Q9Y530 152 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 KCNE1BA0A087WTH5 132 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 CNOT3O75175 753 aaKnown RBP23.75■■□□□ 1.39
PMS1-220ENST00000618056 MED26O95402 600 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 RAB10P61026 200 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 RPS15AP62244 130 aaKnown RBP23.75■■□□□ 1.39
PMS1-220ENST00000618056 CSNK1G2P78368 415 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 PRMT9Q6P2P2 845 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 OVCH1Q7RTY7 1134 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 ALKBH8Q96BT7 664 aaKnown RBP23.75■■□□□ 1.39
PMS1-220ENST00000618056 C10orf90Q96M02 699 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 SLC25A18Q9H1K4 315 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 WDR54Q9H977 334 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 NINJ2Q9NZG7 142 aa23.75■■□□□ 1.39
PMS1-220ENST00000618056 HELZ2Q9BYK8 2649 aaKnown RBP23.74■■□□□ 1.39
PMS1-220ENST00000618056 PHGDHO43175 533 aaKnown RBP23.74■■□□□ 1.39
PMS1-220ENST00000618056 FAM155BO75949 473 aa23.74■■□□□ 1.39
PMS1-220ENST00000618056 ANXA5P08758 320 aa23.74■■□□□ 1.39
PMS1-220ENST00000618056 PHBP35232 272 aa23.74■■□□□ 1.39
PMS1-220ENST00000618056 SSPNQ14714 243 aa23.74■■□□□ 1.39
PMS1-220ENST00000618056 TSNQ15631 228 aaKnown RBP23.74■■□□□ 1.39
PMS1-220ENST00000618056 GARNL3Q5VVW2 1013 aa23.74■■□□□ 1.39
PMS1-220ENST00000618056 COX15Q7KZN9 410 aa23.74■■□□□ 1.39
PMS1-220ENST00000618056 RAB43Q86YS6 212 aa23.74■■□□□ 1.39
PMS1-220ENST00000618056 PLD3Q8IV08 490 aa23.74■■□□□ 1.39
PMS1-220ENST00000618056 ARHGEF39Q8N4T4 335 aa23.74■■□□□ 1.39
PMS1-220ENST00000618056 ABHD11Q8NFV4 315 aa23.74■■□□□ 1.39
PMS1-220ENST00000618056 IFT81Q8WYA0 676 aa23.74■■□□□ 1.39
PMS1-220ENST00000618056 PYCR2Q96C36 320 aa23.74■■□□□ 1.39
PMS1-220ENST00000618056 THAP11Q96EK4 314 aa23.74■■□□□ 1.39
PMS1-220ENST00000618056 MVB12AQ96EY5 273 aa23.74■■□□□ 1.39
PMS1-220ENST00000618056 UBXN10Q96LJ8 280 aa23.74■■□□□ 1.39
PMS1-220ENST00000618056 OR4K3Q96R72 315 aa23.74■■□□□ 1.39
PMS1-220ENST00000618056 RUVBL1Q9Y265 456 aaKnown RBP23.74■■□□□ 1.39
PMS1-220ENST00000618056 PTRH2Q9Y3E5 179 aaKnown RBP23.74■■□□□ 1.39
PMS1-220ENST00000618056 SCN3AQ9NY46 2000 aa23.73■■□□□ 1.39
PMS1-220ENST00000618056 CCDC166P0CW27 439 aa23.73■■□□□ 1.39
PMS1-220ENST00000618056 FOLR3P41439 243 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms