RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 DYTNA2CJ06 578 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 FAM234BA2RU67 622 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 A8MUI8 341 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 NR5A2O00482 541 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 FBP2O00757 339 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 MRASO14807 208 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 KDM1AO60341 852 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 NDUFS2O75306 463 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 CIB2O75838 187 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 RASGRP1O95267 797 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 TNFP01375 233 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 ACPPP15309 386 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 NDUFS1P28331 727 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 RPS9P46781 194 aaKnown RBP8.6□□□□□ -1.03
CCDC47-207ENST00000612558 KCNK10P57789 538 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 UFM1P61960 85 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 TBL3Q12788 808 aaKnown RBP8.6□□□□□ -1.03
CCDC47-207ENST00000612558 KIAA0040Q15053 153 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 RPE65Q16518 533 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 HIST2H2ACQ16777 129 aaPredicted RBP8.6□□□□□ -1.03
CCDC47-207ENST00000612558 ALG11Q2TAA5 492 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 COQ5Q5HYK3 327 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 PRAMEF14Q5SWL7 426 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 CATSPEREQ5SY80 951 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 PRAMEF13Q5VWM6 474 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 REP15Q6BDI9 236 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 HIST2H2AA3Q6FI13 130 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 DUS1LQ6P1R4 473 aaKnown RBP8.6□□□□□ -1.03
CCDC47-207ENST00000612558 MED27Q6P2C8 311 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 PGM2L1Q6PCE3 622 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 CYP20A1Q6UW02 462 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 NXPE4Q6UWF7 544 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 HACD2Q6Y1H2 254 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 PRICKLE2Q7Z3G6 844 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 FAM9CQ8IZT9 166 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 PGAM4Q8N0Y7 254 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 CAMKK1Q8N5S9 505 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 FRMD1Q8N878 549 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 LMNTD1Q8N9Z9 388 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 PJA1Q8NG27 643 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 OR13H1Q8NG92 308 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 PROKR1Q8TCW9 393 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 UBE2E3Q969T4 207 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 SH3KBP1Q96B97 665 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 CMTM7Q96FZ5 175 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 METTL2AQ96IZ6 378 aaKnown RBP8.6□□□□□ -1.03
CCDC47-207ENST00000612558 SERPINI1Q99574 410 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 MENTQ9BUN1 341 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 RAB11FIP5Q9BXF6 653 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 TMEM168Q9H0V1 697 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 PCED1AQ9H1Q7 454 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 RASSF4Q9H2L5 321 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 WDR41Q9HAD4 459 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 VPS29Q9UBQ0 182 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 PCOLCE2Q9UKZ9 415 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 COLEC10Q9Y6Z7 277 aa8.6□□□□□ -1.03
CCDC47-207ENST00000612558 ARHGEF17Q96PE2 2063 aaPredicted RBP8.59□□□□□ -1.03
CCDC47-207ENST00000612558 SPTY2D1-AS1A0A0U1RR47 76 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 A0A1W2PP18 115 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 OR52A4PA6NMU1 304 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 METTL12A8MUP2 240 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 ANGPT2O15123 496 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 SCAMP1O15126 338 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 LILRA1O75019 489 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 MTHFD1P11586 935 aaKnown RBP8.59□□□□□ -1.03
CCDC47-207ENST00000612558 PRPS2P11908 318 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 JAK1P23458 1154 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 MAPK1P28482 360 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 ZFP36L2P47974 494 aaKnown RBP8.59□□□□□ -1.03
CCDC47-207ENST00000612558 RAB28P51157 221 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 POLR2JP52435 117 aaKnown RBP8.59□□□□□ -1.03
CCDC47-207ENST00000612558 RCAN2Q14206 197 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 VPS26BQ4G0F5 336 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 C6orf163Q5TEZ5 329 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 NET1Q7Z628 596 aaPredicted RBP8.59□□□□□ -1.03
CCDC47-207ENST00000612558 C17orf64Q86WR6 236 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 HID1Q8IV36 788 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 LAS2Q8IYD9 372 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 SLC22A18ASQ8N1D0 253 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 FBXW8Q8N3Y1 598 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 C2orf73Q8N5S3 287 aaPredicted RBP8.59□□□□□ -1.03
CCDC47-207ENST00000612558 CADM4Q8NFZ8 388 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 OR7G3Q8NG95 312 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 OR2L8Q8NGY9 312 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 ROPN1LQ96C74 230 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 SPDL1Q96EA4 605 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 CLPTM1LQ96KA5 538 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 TEX37Q96LM6 180 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 CDRT15Q96T59 188 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 MTERF1Q99551 399 aaKnown RBP8.59□□□□□ -1.03
CCDC47-207ENST00000612558 DENND2DQ9H6A0 471 aaPredicted RBP8.59□□□□□ -1.03
CCDC47-207ENST00000612558 SLC52A3Q9NQ40 469 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 GPR27Q9NS67 375 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 SPATA6Q9NWH7 488 aaPredicted RBP8.59□□□□□ -1.03
CCDC47-207ENST00000612558 GEMIN8Q9NWZ8 242 aaKnown RBP8.59□□□□□ -1.03
CCDC47-207ENST00000612558 SCHIP1Q9P0W5 487 aaPredicted RBP8.59□□□□□ -1.03
CCDC47-207ENST00000612558 THEGQ9P2T0 379 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 TBC1D29Q9UFV1 150 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 SLC7A8Q9UHI5 535 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 PNMA8BQ9ULN7 279 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms