RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 AGAP7PQ5VUJ5 663 aa16.53■□□□□ 0.24
PRKN-209ENST00000612485 PALM2Q8IXS6 379 aa16.53■□□□□ 0.24
PRKN-209ENST00000612485 LRRC56Q8IYG6 542 aaPredicted RBP16.53■□□□□ 0.24
PRKN-209ENST00000612485 OR11G2Q8NGC1 345 aa16.53■□□□□ 0.24
PRKN-209ENST00000612485 MCOLN3Q8TDD5 553 aa16.53■□□□□ 0.24
PRKN-209ENST00000612485 CCDC138Q96M89 665 aa16.53■□□□□ 0.24
PRKN-209ENST00000612485 AGAP4Q96P64 663 aa16.53■□□□□ 0.24
PRKN-209ENST00000612485 YIPF2Q9BWQ6 316 aa16.53■□□□□ 0.24
PRKN-209ENST00000612485 LHPPQ9H008 270 aa16.53■□□□□ 0.24
PRKN-209ENST00000612485 CCDC177Q9NQR7 707 aaPredicted RBP16.53■□□□□ 0.24
PRKN-209ENST00000612485 C3orf18Q9UK00 162 aa16.53■□□□□ 0.24
PRKN-209ENST00000612485 TCP11X1B4DZS4 312 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 MAP2K7O14733 419 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 ALOX12BO75342 701 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 AGFG2O95081 481 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 HPP00738 406 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 C8GP07360 202 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 ANXA5P08758 320 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 ACPPP15309 386 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 SP140Q13342 867 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 NDUFA9Q16795 377 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 BBS9Q3SYG4 887 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 VWA2Q5GFL6 755 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 Q6ZS92 163 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 KIAA0408Q6ZU52 694 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 CNTN4Q8IWV2 1026 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 PARP9Q8IXQ6 854 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 PRSS58Q8IYP2 241 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 MYO1HQ8N1T3 1032 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 ANP32BQ92688 251 aaKnown RBP16.52■□□□□ 0.24
PRKN-209ENST00000612485 SNRNP40Q96DI7 357 aaKnown RBP16.52■□□□□ 0.24
PRKN-209ENST00000612485 MMABQ96EY8 250 aaPredicted RBP16.52■□□□□ 0.24
PRKN-209ENST00000612485 RUNDC3BQ96NL0 473 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 NDNQ99608 321 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 WDR77Q9BQA1 342 aaPredicted RBP16.52■□□□□ 0.24
PRKN-209ENST00000612485 PCBD2Q9H0N5 130 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 KCNF1Q9H3M0 494 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 ZBTB20Q9HC78 741 aaPredicted RBP16.52■□□□□ 0.24
PRKN-209ENST00000612485 TMEM184CQ9NVA4 438 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 C14orf105Q9NVL8 296 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 TRPC4Q9UBN4 977 aa16.52■□□□□ 0.24
PRKN-209ENST00000612485 SHANK1Q9Y566 2161 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 H7BY64 318 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 HAT1O14929 419 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 SLC16A5O15375 505 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 GP1BBP13224 206 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 SLC26A3P40879 764 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 TBPL1P62380 186 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 IGFL2Q6UWQ7 119 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 SYDE1Q6ZW31 735 aaPredicted RBP16.51■□□□□ 0.23
PRKN-209ENST00000612485 GALNT7Q86SF2 657 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 SPNS2Q8IVW8 549 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 PDIK1LQ8N165 341 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 CISD2Q8N5K1 135 aaKnown RBP16.51■□□□□ 0.23
PRKN-209ENST00000612485 PPP4R1Q8TF05 950 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 EEF1AKMT1Q8WVE0 214 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 CERS2Q96G23 380 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 THOC3Q96J01 351 aaKnown RBP16.51■□□□□ 0.23
PRKN-209ENST00000612485 PRAP1Q96NZ9 151 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 DRC3Q9H069 523 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 EPS8L2Q9H6S3 715 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 SYNPO2LQ9H987 977 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 PARVBQ9HBI1 364 aa16.51■□□□□ 0.23
PRKN-209ENST00000612485 MKKSQ9NPJ1 570 aaPredicted RBP16.51■□□□□ 0.23
PRKN-209ENST00000612485 CUEDC1Q9NWM3 386 aaPredicted RBP16.51■□□□□ 0.23
PRKN-209ENST00000612485 HEATR5BQ9P2D3 2071 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 BLACEA4D250 179 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 CYSRT1A8MQ03 144 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 PCDH17O14917 1159 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 BANF1O75531 89 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 HIST1H2AGP0C0S8 130 aaPredicted RBP16.5■□□□□ 0.23
PRKN-209ENST00000612485 HIST1H2ADP20671 130 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 CXCR2P25025 360 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 GABRB3P28472 473 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 GLRBP48167 497 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 EMP2P54851 167 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 RPS15AP62244 130 aaKnown RBP16.5■□□□□ 0.23
PRKN-209ENST00000612485 TIAL1Q01085 375 aaKnown RBP eCLIP16.5■□□□□ 0.23
PRKN-209ENST00000612485 FAM53BQ14153 422 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 MORF4L2Q15014 288 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 MSS51Q4VC12 460 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 ATG9BQ674R7 924 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 PAQR3Q6TCH7 311 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 PLD3Q8IV08 490 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 C19orf60Q96EN9 201 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 HIST1H2AHQ96KK5 128 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 PSMG3-AS1Q96PY0 264 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 HIST1H2AJQ99878 128 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 H2AFJQ9BTM1 129 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 TGIF2Q9GZN2 237 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 ZNF160Q9HCG1 818 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 LRRC4CQ9HCJ2 640 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 PPANQ9NQ55 473 aaKnown RBP16.5■□□□□ 0.23
PRKN-209ENST00000612485 ASF1BQ9NVP2 202 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 ADAMTS6Q9UKP5 1117 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 PDE10AQ9Y233 779 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 PCDHGA10Q9Y5H3 936 aa16.5■□□□□ 0.23
PRKN-209ENST00000612485 COPG1Q9Y678 874 aaKnown RBP16.5■□□□□ 0.23
PRKN-209ENST00000612485 PRRC2CQ9Y520 2896 aaKnown RBP16.49■□□□□ 0.23
PRKN-209ENST00000612485 A0A0A6YYC8 382 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms