RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 KCNE2Q9Y6J6 123 aa13.66□□□□□ -0.22
HDDC2-206ENST00000608461 FAM208BQ5VWN6 2430 aa13.66□□□□□ -0.22
HDDC2-206ENST00000608461 LOC400499M0QZD8 3231 aa13.66□□□□□ -0.22
HDDC2-206ENST00000608461 SPTBP11277 2137 aa13.66□□□□□ -0.22
HDDC2-206ENST00000608461 ANKRD12Q6UB98 2062 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 HYKKA2RU49 373 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 H0YGG7 62 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 H7BY64 318 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 ATXN7O15265 892 aaPredicted RBP13.65□□□□□ -0.22
HDDC2-206ENST00000608461 KATNA1O75449 491 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 ALBP02768 609 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 CAPN1P07384 714 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 LTA4HP09960 611 aaKnown RBP13.65□□□□□ -0.22
HDDC2-206ENST00000608461 SFTPCP11686 197 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 GGT5P36269 586 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 MSH2P43246 934 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 SERPINB8P50452 374 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 CCR8P51685 355 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 PMS2P54278 862 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 VSX2P58304 361 aaPredicted RBP13.65□□□□□ -0.22
HDDC2-206ENST00000608461 ARF3P61204 181 aaPredicted RBP13.65□□□□□ -0.22
HDDC2-206ENST00000608461 YBX1P67809 324 aaKnown RBP13.65□□□□□ -0.22
HDDC2-206ENST00000608461 CDC20Q12834 499 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 EFTUD2Q15029 972 aaKnown RBP eCLIP13.65□□□□□ -0.22
HDDC2-206ENST00000608461 NCF4Q15080 339 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 FAM83EQ2M2I3 478 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 ZXDCQ2QGD7 858 aaPredicted RBP13.65□□□□□ -0.22
HDDC2-206ENST00000608461 MUM1Q2TAK8 710 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 PRTGQ2VWP7 1150 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 NKAIN1Q4KMZ8 207 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 TAF1BQ53T94 588 aaPredicted RBP13.65□□□□□ -0.22
HDDC2-206ENST00000608461 MROH9Q5TGP6 573 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 SULT1C3Q6IMI6 304 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 FRMPD2BQ6IN97 320 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 FAM199XQ6PEV8 388 aaPredicted RBP13.65□□□□□ -0.22
HDDC2-206ENST00000608461 ADCK2Q7Z695 626 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 GPSM1Q86YR5 675 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 OR4K1Q8NGD4 311 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 RHEBL1Q8TAI7 183 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 THAP4Q8WY91 577 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 ISL2Q96A47 359 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 FKBP10Q96AY3 582 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 NACC2Q96BF6 587 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 RHBDF1Q96CC6 855 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 PRAP1Q96NZ9 151 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 ACTL8Q9H568 366 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 GPN3Q9UHW5 284 aaPredicted RBP13.65□□□□□ -0.22
HDDC2-206ENST00000608461 IKZF3Q9UKT9 509 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 CDC14AQ9UNH5 594 aa13.65□□□□□ -0.22
HDDC2-206ENST00000608461 SEC16AO15027 2179 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 LOC105369274A0A096LPK9 316 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 LOC102723532A0A0G2JNH3 316 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 HMX2A2RU54 273 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 ESPNB1AK53 854 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 NKX2-8O15522 239 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 PRPF4O43172 522 aaKnown RBP eCLIP13.64□□□□□ -0.232e-12■■■□□ 16.2
HDDC2-206ENST00000608461 ALAS2P22557 587 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 TYK2P29597 1187 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 CSNK1G2P78368 415 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 FAM53BQ14153 422 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 CSHL1Q14406 222 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 UAP1Q16222 522 aaPredicted RBP13.64□□□□□ -0.23
HDDC2-206ENST00000608461 UGT8Q16880 541 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 PTCHD3Q3KNS1 767 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 KLC3Q6P597 504 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 BORAQ6PGQ7 559 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 FAM198BQ6UWH4 519 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 TTLL10Q6ZVT0 673 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 ISCA2Q86U28 154 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 THOC6Q86W42 341 aaKnown RBP13.64□□□□□ -0.23
HDDC2-206ENST00000608461 OR4N4Q8N0Y3 316 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 PDPRQ8NCN5 879 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 PYCR2Q96C36 320 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 IP6K3Q96PC2 410 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 PAFAH2Q99487 392 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 TXLNGYQ9BZA5 131 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 SLC26A1Q9H2B4 701 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 WDR54Q9H977 334 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 SNX15Q9NRS6 342 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 ABCF3Q9NUQ8 709 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 CUEDC1Q9NWM3 386 aaPredicted RBP13.64□□□□□ -0.23
HDDC2-206ENST00000608461 IFT80Q9P2H3 777 aaPredicted RBP13.64□□□□□ -0.23
HDDC2-206ENST00000608461 DHCR7Q9UBM7 475 aaKnown RBP13.64□□□□□ -0.23
HDDC2-206ENST00000608461 NDOR1Q9UHB4 597 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 TCFL5Q9UL49 500 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 POLHQ9Y253 713 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 DYRK1BQ9Y463 629 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 IGSF10Q6WRI0 2623 aa13.64□□□□□ -0.23
HDDC2-206ENST00000608461 EXOC1LA0A1B0GW35 172 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 SYCE1LA8MT33 242 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 HAT1O14929 419 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 RIPK2O43353 540 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 KLHL2O95198 593 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 ALDOAP04075 364 aaKnown RBP13.63□□□□□ -0.23
HDDC2-206ENST00000608461 S100BP04271 92 aaPredicted RBP13.63□□□□□ -0.23
HDDC2-206ENST00000608461 EIF2S1P05198 315 aaKnown RBP13.63□□□□□ -0.23
HDDC2-206ENST00000608461 C2P06681 752 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 CTSBP07858 339 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 COL6A2P12110 1019 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 GNAZP19086 355 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms