RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 PLEKHB1Q9UF11 243 aaPredicted RBP17.88■□□□□ 0.45
PNKP-213ENST00000599543 SVILO95425 2214 aa17.88■□□□□ 0.45
PNKP-213ENST00000599543 MAGEB16A2A368 324 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 OR2A25A4D2G3 310 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 ZNF839A8K0R7 811 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 MYO1CO00159 1063 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 PSIP1O75475 530 aaKnown RBP17.87■□□□□ 0.45
PNKP-213ENST00000599543 USP1O94782 785 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 CATP04040 527 aaKnown RBP17.87■□□□□ 0.45
PNKP-213ENST00000599543 TUBB4AP04350 444 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 ERGP11308 486 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 PGAM1P18669 254 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 CARSP49589 748 aaKnown RBP17.87■□□□□ 0.45
PNKP-213ENST00000599543 PLTPP55058 493 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 PDIA2Q13087 525 aaKnown RBP17.87■□□□□ 0.45
PNKP-213ENST00000599543 CALCOCO2Q13137 446 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 CTBP1Q13363 440 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 MUM1Q2TAK8 710 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 TTLL9Q3SXZ7 439 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 C4orf17Q53FE4 359 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 ACSBG2Q5FVE4 666 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 SUSD1Q6UWL2 747 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 Q6ZS92 163 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 CAPN12Q6ZSI9 719 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 CENPUQ71F23 418 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.87■□□□□ 0.45
PNKP-213ENST00000599543 LRRN4CLQ8ND94 238 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 WDR77Q9BQA1 342 aaPredicted RBP17.87■□□□□ 0.45
PNKP-213ENST00000599543 FBXO6Q9NRD1 293 aaPredicted RBP17.87■□□□□ 0.45
PNKP-213ENST00000599543 GALPQ9UBC7 116 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 UTP11Q9Y3A2 253 aaKnown RBP17.87■□□□□ 0.45
PNKP-213ENST00000599543 CENPEQ02224 2701 aa17.87■□□□□ 0.45
PNKP-213ENST00000599543 CTAGE15A4D2H0 777 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 VSTM2BA6NLU5 285 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 MED26O95402 600 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 CTAGE8P0CG41 777 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 FBLP22087 321 aaKnown RBP17.86■□□□□ 0.45
PNKP-213ENST00000599543 HSD17B2P37059 387 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 GLRBP48167 497 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 YBX1P67809 324 aaKnown RBP17.86■□□□□ 0.45
PNKP-213ENST00000599543 KLC1Q07866 573 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 THOC5Q13769 683 aaKnown RBP17.86■□□□□ 0.45
PNKP-213ENST00000599543 ELOAQ14241 798 aaKnown RBP17.86■□□□□ 0.45
PNKP-213ENST00000599543 ARHGAP19Q14CB8 494 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 LONRF1Q17RB8 773 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 HSP90AA5PQ58FG0 334 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 CTAGE6Q86UF2 777 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 CUZD1Q86UP6 607 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 CTAGE4Q8IX94 777 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 PARP9Q8IXQ6 854 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 PRSS58Q8IYP2 241 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 OR11G2Q8NGC1 345 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 PPP4R1Q8TF05 950 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 INPP5DQ92835 1189 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 MIEF2Q96C03 454 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 LHPPQ9H008 270 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 CCDC68Q9H2F9 335 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 IARS2Q9NSE4 1012 aaKnown RBP17.86■□□□□ 0.45
PNKP-213ENST00000599543 UTP6Q9NYH9 597 aaKnown RBP17.86■□□□□ 0.45
PNKP-213ENST00000599543 WHRNQ9P202 907 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 TAC3Q9UHF0 121 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 PCDHGA10Q9Y5H3 936 aa17.86■□□□□ 0.45
PNKP-213ENST00000599543 COPG1Q9Y678 874 aaKnown RBP17.86■□□□□ 0.45
PNKP-213ENST00000599543 H0YGG7 62 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 CCNDBP1O95273 360 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 CBX6O95503 412 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 ZGLP1P0C6A0 271 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 ACPPP15309 386 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 CLCN7P51798 805 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 PNLIPRP1P54315 467 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 ARF3P61204 181 aaPredicted RBP17.85■□□□□ 0.45
PNKP-213ENST00000599543 MPP1Q00013 466 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 GUCY2DQ02846 1103 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 POLEQ07864 2286 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 TRMT10BQ6PF06 316 aaKnown RBP17.85■□□□□ 0.45
PNKP-213ENST00000599543 ZDHHC24Q6UX98 284 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 KCNMB4Q86W47 210 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 CCDC25Q86WR0 208 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 MMGT1Q8N4V1 131 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 FBXO36Q8NEA4 188 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 MNS1Q8NEH6 495 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 STT3BQ8TCJ2 826 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 THOC3Q96J01 351 aaKnown RBP17.85■□□□□ 0.45
PNKP-213ENST00000599543 C10orf90Q96M02 699 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 PKP4Q99569 1192 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 PLCD4Q9BRC7 762 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 RAB17Q9H0T7 212 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 EPS8L2Q9H6S3 715 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 SAYSD1Q9NPB0 183 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 AGPAT4Q9NRZ5 378 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 STOX2Q9P2F5 926 aaPredicted RBP17.85■□□□□ 0.45
PNKP-213ENST00000599543 DMGDHQ9UI17 866 aaKnown RBP17.85■□□□□ 0.45
PNKP-213ENST00000599543 C3orf18Q9UK00 162 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 CDC14AQ9UNH5 594 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 TEX264Q9Y6I9 313 aa17.85■□□□□ 0.45
PNKP-213ENST00000599543 ANKUB1A6NFN9 424 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 MAP2K7O14733 419 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 PRPF4O43172 522 aaKnown RBP eCLIP17.84■□□□□ 0.45
PNKP-213ENST00000599543 DDAH2O95865 285 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 SLC16A8O95907 504 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms