RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 GPR42O15529 346 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 TTI1O43156 1089 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 SRPX2O60687 465 aaPredicted RBP13.13□□□□□ -0.31
SCAF1-203ENST00000598359 VPS26AO75436 327 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 IMPA1P29218 277 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 ELK3P41970 407 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 CD97P48960 835 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 SNRPNP63162 240 aaKnown RBP13.13□□□□□ -0.31
SCAF1-203ENST00000598359 MRPS25P82663 173 aaKnown RBP13.13□□□□□ -0.31
SCAF1-203ENST00000598359 DR1Q01658 176 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 TAP2Q03519 686 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 ARHGAP19Q14CB8 494 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 HKDC1Q2TB90 917 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 C4orf17Q53FE4 359 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 SPANXN3Q5MJ09 141 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 DCAF10Q5QP82 559 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 ICE2Q659A1 982 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 MBOAT1Q6ZNC8 495 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 ADCK2Q7Z695 626 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 LMNTD2Q8IXW0 634 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 SLCO2A1Q92959 643 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 FKBP10Q96AY3 582 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 RUNDC3BQ96NL0 473 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 TRIM31Q9BZY9 425 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 ACBD3Q9H3P7 528 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 PPANQ9NQ55 473 aaKnown RBP13.13□□□□□ -0.31
SCAF1-203ENST00000598359 KLHL42Q9P2K6 505 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 TRMT6Q9UJA5 497 aaKnown RBP13.13□□□□□ -0.31
SCAF1-203ENST00000598359 FBXL4Q9UKA2 621 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 ZNF451Q9Y4E5 1061 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 FAM187AA6NFU0 413 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 HAT1O14929 419 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 ZBTB14O43829 449 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 AHSGP02765 367 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 ENO3P13929 434 aaPredicted RBP13.12□□□□□ -0.31
SCAF1-203ENST00000598359 SLC7A5Q01650 507 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 PRDX1Q06830 199 aaKnown RBP13.12□□□□□ -0.31
SCAF1-203ENST00000598359 PRTGQ2VWP7 1150 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 FAM214AQ32MH5 1076 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 THEMIS2Q5TEJ8 643 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 ZNF425Q6IV72 752 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 JMJD6Q6NYC1 403 aaPredicted RBP13.12□□□□□ -0.31
SCAF1-203ENST00000598359 TRMT10BQ6PF06 316 aaKnown RBP13.12□□□□□ -0.31
SCAF1-203ENST00000598359 PAQR3Q6TCH7 311 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 MAATS1Q7Z4T9 603 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 PCGF5Q86SE9 256 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 ANKMY2Q8IV38 441 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 LRRC56Q8IYG6 542 aaPredicted RBP13.12□□□□□ -0.31
SCAF1-203ENST00000598359 GALNT16Q8N428 558 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 MREGQ8N565 214 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 CSNK1A1LQ8N752 337 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 RBMXL3Q8N7X1 1067 aaKnown RBP13.12□□□□□ -0.31
SCAF1-203ENST00000598359 CLEC1AQ8NC01 280 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 FBXO15Q8NCQ5 510 aaPredicted RBP13.12□□□□□ -0.31
SCAF1-203ENST00000598359 CERS2Q96G23 380 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 CABS1Q96KC9 395 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 FER1L6-AS2Q96M78 137 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 ZBTB20Q9HC78 741 aaPredicted RBP13.12□□□□□ -0.31
SCAF1-203ENST00000598359 ZNF304Q9HCX3 659 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 SH2B3Q9UQQ2 575 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 RUVBL1Q9Y265 456 aaKnown RBP13.12□□□□□ -0.31
SCAF1-203ENST00000598359 HS3ST3B1Q9Y662 390 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 COMMD10Q9Y6G5 202 aa13.12□□□□□ -0.31
SCAF1-203ENST00000598359 H7BY64 318 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 AGPSO00116 658 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 SOCS6O14544 535 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 P2RX6O15547 441 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 SORBS2O94875 1100 aaKnown RBP13.11□□□□□ -0.31
SCAF1-203ENST00000598359 TTC4O95801 387 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 ONECUT2O95948 504 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 ALBP02768 609 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 CD63P08962 238 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 PIM1P11309 404 aaPredicted RBP13.11□□□□□ -0.31
SCAF1-203ENST00000598359 MMP11P24347 488 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 SKIV2L2P42285 1042 aaKnown RBP13.11□□□□□ -0.31
SCAF1-203ENST00000598359 UQCRFS1P47985 274 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 ITGA8P53708 1063 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 YOD1Q5VVQ6 348 aaPredicted RBP13.11□□□□□ -0.31
SCAF1-203ENST00000598359 SLC6A19Q695T7 634 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 HIBCHQ6NVY1 386 aaPredicted RBP13.11□□□□□ -0.31
SCAF1-203ENST00000598359 Q8NA96 180 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 CPT1CQ8TCG5 803 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 ALKBH8Q96BT7 664 aaKnown RBP13.11□□□□□ -0.31
SCAF1-203ENST00000598359 LINGO1Q96FE5 620 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 PRAP1Q96NZ9 151 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 IP6K3Q96PC2 410 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 OR2A5Q96R48 311 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 SMAD5Q99717 465 aaKnown RBP13.11□□□□□ -0.31
SCAF1-203ENST00000598359 SLC26A1Q9H2B4 701 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 WDR54Q9H977 334 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 ENAMQ9NRM1 1142 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 G3BP2Q9UN86 482 aaKnown RBP13.11□□□□□ -0.31
SCAF1-203ENST00000598359 PDE10AQ9Y233 779 aa13.11□□□□□ -0.31
SCAF1-203ENST00000598359 VSTM2BA6NLU5 285 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 ZNF839A8K0R7 811 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 TP73O15350 636 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 DPM1O60762 260 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 CCNDBP1O95273 360 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 FBLP22087 321 aaKnown RBP13.1□□□□□ -0.31
SCAF1-203ENST00000598359 ECHS1P30084 290 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms