RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 TREX1Q9NSU2 369 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 STMN3Q9NZ72 180 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 GNPTGQ9UJJ9 305 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 TINAGQ9UJW2 476 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 MKL2Q9ULH7 1088 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 PACSIN2Q9UNF0 486 aaPredicted RBP9.45□□□□□ -0.9
LIG1-209ENST00000596104 ZNF835Q9Y2P0 537 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 CELSR1Q9NYQ6 3014 aa9.45□□□□□ -0.9
LIG1-209ENST00000596104 MTORP42345 2549 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 A0A0A6YYC8 382 aaPredicted RBP9.44□□□□□ -0.9
LIG1-209ENST00000596104 ARHGEF33A8MVX0 844 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 MIF4GDA9UHW6 222 aaKnown RBP9.44□□□□□ -0.9
LIG1-209ENST00000596104 I3L1I5 382 aaPredicted RBP9.44□□□□□ -0.9
LIG1-209ENST00000596104 MYO1CO00159 1063 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 P2RX6O15547 441 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 LIASO43766 372 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 VPS26AO75436 327 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 PTMAP06454 111 aaKnown RBP9.44□□□□□ -0.9
LIG1-209ENST00000596104 UQCRHP07919 91 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 ANXA5P08758 320 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 ARNTP27540 789 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 ATP5DP30049 168 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 SSTR2P30874 369 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 KIR3DL1P43629 444 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 KRTAP10-9P60411 292 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 AP2B1P63010 937 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 MAT1AQ00266 395 aaKnown RBP9.44□□□□□ -0.9
LIG1-209ENST00000596104 RELAQ04206 551 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 ZNF33BQ06732 778 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 LONRF1Q17RB8 773 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 ZNF766Q5HY98 468 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 H3F3CQ6NXT2 135 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 SUSD1Q6UWL2 747 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 RAD9BQ6WBX8 426 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 Q6ZPB1 254 aaPredicted RBP9.44□□□□□ -0.9
LIG1-209ENST00000596104 PEX26Q7Z412 305 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 PRUNE1Q86TP1 453 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 SHISA5Q8N114 240 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 ACBD4Q8NC06 268 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 MDS2Q8NDY4 140 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 OR9A1PQ8NGU1 263 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 MAGEC3Q8TD91 643 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 THAP3Q8WTV1 239 aaPredicted RBP9.44□□□□□ -0.9
LIG1-209ENST00000596104 SMPDL3AQ92484 453 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 GPR137Q96N19 417 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 FOPNLQ96NB1 174 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 BIRC8Q96P09 236 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 TUBB6Q9BUF5 446 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 VN1R1Q9GZP7 353 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 DRC3Q9H069 523 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 MRPS30Q9NP92 439 aaKnown RBP9.44□□□□□ -0.9
LIG1-209ENST00000596104 RAB6BQ9NRW1 208 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 ANAPC5Q9UJX4 755 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 ITGB1BP2Q9UKP3 347 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 AMFRQ9UKV5 643 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 PCDHGB6Q9Y5F9 930 aa9.44□□□□□ -0.9
LIG1-209ENST00000596104 DCHS2Q6V1P9 2916 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 SETD2Q9BYW2 2564 aaPredicted RBP9.43□□□□□ -0.9
LIG1-209ENST00000596104 IGHV3-20A0A0C4DH32 117 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 ASPDHA6ND91 283 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 E7EVH7 732 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 NIPSNAP2O75323 286 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 PSIP1O75475 530 aaKnown RBP9.43□□□□□ -0.9
LIG1-209ENST00000596104 NDUFS3O75489 264 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 SEC24DO94855 1032 aaPredicted RBP9.43□□□□□ -0.9
LIG1-209ENST00000596104 FTCDO95954 541 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 IFNB1P01574 187 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 APRTP07741 180 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 C8orf89P0DMQ9 161 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 MYBL2P10244 700 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 ETS1P14921 441 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 EZRP15311 586 aaKnown RBP9.43□□□□□ -0.9
LIG1-209ENST00000596104 NMBRP28336 390 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 SMSP52788 366 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 CASP6P55212 293 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 EIF3BP55884 814 aaKnown RBP9.43□□□□□ -0.9
LIG1-209ENST00000596104 CRADDP78560 199 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 PRDX1Q06830 199 aaKnown RBP9.43□□□□□ -0.9
LIG1-209ENST00000596104 FAM53BQ14153 422 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 ARHGAP19Q14CB8 494 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 ANKRD20A4Q4UJ75 823 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 ACSBG2Q5FVE4 666 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 PCID2Q5JVF3 399 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 ICE2Q659A1 982 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 PLAG1Q6DJT9 500 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 LANCL3Q6ZV70 420 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 BEST3Q8N1M1 668 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 UBL4BQ8N7F7 174 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 ACRBPQ8NEB7 543 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 PPHLN1Q8NEY8 458 aaKnown RBP9.43□□□□□ -0.9
LIG1-209ENST00000596104 LPGAT1Q92604 370 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 MTFMTQ96DP5 389 aaKnown RBP9.43□□□□□ -0.9
LIG1-209ENST00000596104 C14orf79Q96F83 325 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 SIGLEC12Q96PQ1 595 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 PANX2Q96RD6 677 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 HES7Q9BYE0 225 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 TSPY26PQ9H489 355 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 TAC3Q9UHF0 121 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 PCYOX1Q9UHG3 505 aa9.43□□□□□ -0.9
LIG1-209ENST00000596104 TEKT2Q9UIF3 430 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms