RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 NELL1Q92832 810 aa20.02■□□□□ 0.79
PNKP-203ENST00000593946 UBE2E3Q969T4 207 aa20.02■□□□□ 0.79
PNKP-203ENST00000593946 KLHL29Q96CT2 875 aa20.02■□□□□ 0.79
PNKP-203ENST00000593946 ERVMER34-1Q9H9K5 563 aa20.02■□□□□ 0.79
PNKP-203ENST00000593946 NOP53Q9NZM5 478 aaKnown RBP20.02■□□□□ 0.79
PNKP-203ENST00000593946 RRP15Q9Y3B9 282 aaKnown RBP20.02■□□□□ 0.79
PNKP-203ENST00000593946 IGKV1-8A0A0C4DH67 115 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 LOC100653049A0A140TA62 436 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 A0A1B0GVT2 93 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 AQP9O43315 295 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 HRO43593 1189 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 KRT34O76011 436 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 THRAP10827 490 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 PCNAP12004 261 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 MNAT1P51948 309 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 CORO7P57737 925 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 MAD2L1Q13257 205 aaPredicted RBP20.01■□□□□ 0.79
PNKP-203ENST00000593946 DDX39BQ13838 428 aaKnown RBP20.01■□□□□ 0.79
PNKP-203ENST00000593946 KIAA0040Q15053 153 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 PLCL1Q15111 1095 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 AGKQ53H12 422 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 TMIGD1Q6UXZ0 262 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 SNX32Q86XE0 403 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 KRT78Q8N1N4 520 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 OR9I1Q8NGQ6 314 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 CMTM7Q96FZ5 175 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 ASIC5Q9NY37 505 aa20.01■□□□□ 0.79
PNKP-203ENST00000593946 MAGEB17A8MXT2 336 aa20■□□□□ 0.79
PNKP-203ENST00000593946 B4DGG1 531 aa20■□□□□ 0.79
PNKP-203ENST00000593946 LMO7DNF2Z398 122 aa20■□□□□ 0.79
PNKP-203ENST00000593946 FOXE1O00358 373 aaPredicted RBP20■□□□□ 0.79
PNKP-203ENST00000593946 BTN3A3O00478 584 aa20■□□□□ 0.79
PNKP-203ENST00000593946 YY2O15391 372 aa20■□□□□ 0.79
PNKP-203ENST00000593946 GPR37L1O60883 481 aa20■□□□□ 0.79
PNKP-203ENST00000593946 SEC22BO75396 215 aa20■□□□□ 0.79
PNKP-203ENST00000593946 GNSP15586 552 aa20■□□□□ 0.79
PNKP-203ENST00000593946 ABATP80404 500 aa20■□□□□ 0.79
PNKP-203ENST00000593946 REEP5Q00765 189 aa20■□□□□ 0.79
PNKP-203ENST00000593946 CYLC2Q14093 348 aaPredicted RBP20■□□□□ 0.79
PNKP-203ENST00000593946 ZNF423Q2M1K9 1284 aa20■□□□□ 0.79
PNKP-203ENST00000593946 PDCD4Q53EL6 469 aaKnown RBP20■□□□□ 0.79
PNKP-203ENST00000593946 PAOXQ6QHF9 649 aa20■□□□□ 0.79
PNKP-203ENST00000593946 RINLQ6ZS11 566 aa20■□□□□ 0.79
PNKP-203ENST00000593946 SLC9B2Q86UD5 537 aa20■□□□□ 0.79
PNKP-203ENST00000593946 RBM12BQ8IXT5 1001 aaKnown RBP20■□□□□ 0.79
PNKP-203ENST00000593946 OR2L3Q8NG85 312 aa20■□□□□ 0.79
PNKP-203ENST00000593946 AIF1LQ9BQI0 150 aa20■□□□□ 0.79
PNKP-203ENST00000593946 PITHD1Q9GZP4 211 aaPredicted RBP20■□□□□ 0.79
PNKP-203ENST00000593946 TMEM74BQ9NUR3 256 aa20■□□□□ 0.79
PNKP-203ENST00000593946 CCDC167Q9P0B6 97 aa20■□□□□ 0.79
PNKP-203ENST00000593946 PILRBQ9UKJ0 227 aa20■□□□□ 0.79
PNKP-203ENST00000593946 POLR3HQ9Y535 204 aaPredicted RBP20■□□□□ 0.79
PNKP-203ENST00000593946 FAM221BA6H8Z2 402 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 H7BY64 318 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 PIAS2O75928 621 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 CXCR2P25025 360 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 PIK3CBP42338 1070 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 CTSKP43235 329 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 HHEXQ03014 270 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 RPS6KA2Q15349 733 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 IL23RQ5VWK5 629 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 GK5Q6ZS86 529 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 FUNDC1Q8IVP5 155 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 FBXL6Q8N531 539 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 FBXO27Q8NI29 283 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 PRAP1Q96NZ9 151 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 MRPS30Q9NP92 439 aaKnown RBP19.99■□□□□ 0.79
PNKP-203ENST00000593946 TAS2R1Q9NYW7 299 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 VPS29Q9UBQ0 182 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 B2RBV5 119 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 CCNDBP1O95273 360 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 CSNK1G2P78368 415 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 KIR2DS3Q14952 304 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 MAPRE2Q15555 327 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 TMEM26Q6ZUK4 368 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 KIF2BQ8N4N8 673 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 SLC22A18Q96BI1 424 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 METTL2AQ96IZ6 378 aaKnown RBP19.99■□□□□ 0.79
PNKP-203ENST00000593946 ZC3H10Q96K80 434 aaKnown RBP19.99■□□□□ 0.79
PNKP-203ENST00000593946 BTBD10Q9BSF8 475 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 C1orf21Q9H246 121 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 NT5DC2Q9H857 520 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 SLC6A20Q9NP91 592 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 DMRT3Q9NQL9 472 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 ZIM2Q9NZV7 527 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 SUSD2Q9UGT4 822 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 PPT2Q9UMR5 302 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 DOLKQ9UPQ8 538 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 EIF3LQ9Y262 564 aaKnown RBP19.99■□□□□ 0.79
PNKP-203ENST00000593946 TMED5Q9Y3A6 229 aa19.99■□□□□ 0.79
PNKP-203ENST00000593946 VPS13AQ96RL7 3174 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 ISM1B1AKI9 464 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 ETHE1O95571 254 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 G6PDP11413 515 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 ACPPP15309 386 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 AMD1P17707 334 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 NME5P56597 212 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 RPS13P62277 151 aaKnown RBP19.98■□□□□ 0.79
PNKP-203ENST00000593946 BNC1Q01954 994 aa19.98■□□□□ 0.79
PNKP-203ENST00000593946 SF1Q15637 639 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms