RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 CDC16Q13042 620 aa19.9■□□□□ 0.78
DNMT1-227ENST00000592342 SETDB1Q15047 1291 aa19.9■□□□□ 0.78
DNMT1-227ENST00000592342 PDK4Q16654 411 aa19.9■□□□□ 0.78
DNMT1-227ENST00000592342 TCTE1Q5JU00 501 aa19.9■□□□□ 0.78
DNMT1-227ENST00000592342 FBXO42Q6P3S6 717 aa19.9■□□□□ 0.78
DNMT1-227ENST00000592342 TLDC1Q6P9B6 456 aa19.9■□□□□ 0.78
DNMT1-227ENST00000592342 LRRC70Q7Z2Q7 622 aa19.9■□□□□ 0.78
DNMT1-227ENST00000592342 TMPRSS11BQ86T26 416 aa19.9■□□□□ 0.78
DNMT1-227ENST00000592342 PLD3Q8IV08 490 aa19.9■□□□□ 0.78
DNMT1-227ENST00000592342 C4orf33Q8N1A6 199 aa19.9■□□□□ 0.78
DNMT1-227ENST00000592342 TBC1D19Q8N5T2 526 aa19.9■□□□□ 0.78
DNMT1-227ENST00000592342 SNIP1Q8TAD8 396 aaKnown RBP19.9■□□□□ 0.78
DNMT1-227ENST00000592342 KCNE4Q8WWG9 221 aa19.9■□□□□ 0.78
DNMT1-227ENST00000592342 RERGQ96A58 199 aaPredicted RBP19.9■□□□□ 0.78
DNMT1-227ENST00000592342 CLIP3Q96DZ5 547 aa19.9■□□□□ 0.78
DNMT1-227ENST00000592342 SPRTNQ9H040 489 aaPredicted RBP19.9■□□□□ 0.78
DNMT1-227ENST00000592342 GPRC5BQ9NZH0 403 aa19.9■□□□□ 0.78
DNMT1-227ENST00000592342 ACSL6Q9UKU0 697 aa19.9■□□□□ 0.78
DNMT1-227ENST00000592342 TNPO3Q9Y5L0 923 aaKnown RBP19.9■□□□□ 0.78
DNMT1-227ENST00000592342 RGS16O15492 202 aaPredicted RBP19.89■□□□□ 0.77
DNMT1-227ENST00000592342 RRP8O43159 456 aaKnown RBP19.89■□□□□ 0.77
DNMT1-227ENST00000592342 KLK8O60259 260 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 CPNE3O75131 537 aaKnown RBP19.89■□□□□ 0.77
DNMT1-227ENST00000592342 NTRK1P04629 796 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 LIPCP11150 499 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 ZNF28P17035 718 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 AGTR2P50052 363 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 ATP1A2P50993 1020 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 RPS15AP62244 130 aaKnown RBP19.89■□□□□ 0.77
DNMT1-227ENST00000592342 RELAQ04206 551 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 CATSPEREQ5SY80 951 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 FRMPD2BQ6IN97 320 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 C16orf46Q6P387 395 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 PROSER1Q86XN7 944 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 SRRM1Q8IYB3 904 aaKnown RBP19.89■□□□□ 0.77
DNMT1-227ENST00000592342 IQCKQ8N0W5 287 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 PTGR2Q8N8N7 351 aaPredicted RBP19.89■□□□□ 0.77
DNMT1-227ENST00000592342 TTC29Q8NA56 475 aaPredicted RBP19.89■□□□□ 0.77
DNMT1-227ENST00000592342 UBTD2Q8WUN7 234 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 PHF21BQ96EK2 531 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 DCBLD2Q96PD2 775 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 RUFY1Q96T51 708 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 IQCGQ9H095 443 aaKnown RBP19.89■□□□□ 0.77
DNMT1-227ENST00000592342 CENPHQ9H3R5 247 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 ACTR5Q9H9F9 607 aaPredicted RBP19.89■□□□□ 0.77
DNMT1-227ENST00000592342 PELI2Q9HAT8 420 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 PILRAQ9UKJ1 303 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 GRID1Q9ULK0 1009 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 TMEM184BQ9Y519 407 aaPredicted RBP19.89■□□□□ 0.77
DNMT1-227ENST00000592342 PCDHB3Q9Y5E6 796 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 AP1M2Q9Y6Q5 423 aa19.89■□□□□ 0.77
DNMT1-227ENST00000592342 K7EPI3 171 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 ZSCAN9O15535 394 aaPredicted RBP19.88■□□□□ 0.77
DNMT1-227ENST00000592342 ZNF749O43361 778 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 RAD1O60671 282 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 H2AFYO75367 372 aaKnown RBP19.88■□□□□ 0.77
DNMT1-227ENST00000592342 CAPNS1P04632 268 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 HBQ1P09105 142 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 WASHC2DQ5SRD0 308 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 PRAMEF17Q5VTA0 474 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 NXPE4Q6UWF7 544 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 C6orf15Q6UXA7 325 aaPredicted RBP19.88■□□□□ 0.77
DNMT1-227ENST00000592342 LRIG3Q6UXM1 1119 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 TRABD2AQ86V40 505 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 NLGN4XQ8N0W4 816 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 ZNF655Q8N720 491 aaPredicted RBP19.88■□□□□ 0.77
DNMT1-227ENST00000592342 ABHD11Q8NFV4 315 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 NLGN4YQ8NFZ3 816 aaPredicted RBP19.88■□□□□ 0.77
DNMT1-227ENST00000592342 CNTNAP3BQ96NU0 1288 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 AIF1LQ9BQI0 150 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 NDC1Q9BTX1 674 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 CNTNAP3Q9BZ76 1288 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 PCM1Q15154 2024 aa19.88■□□□□ 0.77
DNMT1-227ENST00000592342 LOC105369274A0A096LPK9 316 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 LOC102723532A0A0G2JNH3 316 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 FEZF1A0PJY2 475 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 H0YGG7 62 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 CCNYL3P0C7X3 344 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 EPB42P16452 691 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 CXCR2P25025 360 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 CRHR1P34998 444 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 ARF3P61204 181 aaPredicted RBP19.87■□□□□ 0.77
DNMT1-227ENST00000592342 MEF2AQ02078 507 aaPredicted RBP19.87■□□□□ 0.77
DNMT1-227ENST00000592342 GRM7Q14831 915 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 PCBP2Q15366 365 aaKnown RBP eCLIP19.87■□□□□ 0.77
DNMT1-227ENST00000592342 LRRC69Q6ZNQ3 347 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 OR4N4Q8N0Y3 316 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 ESX1Q8N693 406 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 IL22RA1Q8N6P7 574 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 TEX9Q8N6V9 391 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 CCDC63Q8NA47 563 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 KDF1Q8NAX2 398 aaPredicted RBP19.87■□□□□ 0.77
DNMT1-227ENST00000592342 GALNT6Q8NCL4 622 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 THAP11Q96EK4 314 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 OR2A5Q96R48 311 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 SMC6Q96SB8 1091 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 NLNQ9BYT8 704 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 STARD5Q9NSY2 213 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 TXLNGQ9NUQ3 528 aa19.87■□□□□ 0.77
DNMT1-227ENST00000592342 SRPK3Q9UPE1 567 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms