RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 NDUFA9Q16795 377 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 UGT8Q16880 541 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 MUM1Q2TAK8 710 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 PRTGQ2VWP7 1150 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 PTCHD3Q3KNS1 767 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 NKAIN1Q4KMZ8 207 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 LGSNQ5TDP6 509 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 FRMPD2BQ6IN97 320 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 LCN10Q6JVE6 187 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 C16orf46Q6P387 395 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 FAM198BQ6UWH4 519 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 MBOAT1Q6ZNC8 495 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 TTLL10Q6ZVT0 673 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 TAOK1Q7L7X3 1001 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 ADCK2Q7Z695 626 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 TBC1D1Q86TI0 1168 aaPredicted RBP9.66□□□□□ -0.86
TPM4-207ENST00000588032 GPSM1Q86YR5 675 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 OR4N4Q8N0Y3 316 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 TBC1D19Q8N5T2 526 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 ENDOVQ8N8Q3 282 aaKnown RBP9.66□□□□□ -0.86
TPM4-207ENST00000588032 ABHD11Q8NFV4 315 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 STAG3L4Q8TBR4 150 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 APOBEC4Q8WW27 367 aaKnown RBP9.66□□□□□ -0.86
TPM4-207ENST00000588032 SLC44A1Q8WWI5 657 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.66□□□□□ -0.86
TPM4-207ENST00000588032 KIAA1191Q96A73 305 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 FKBP10Q96AY3 582 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 NACC2Q96BF6 587 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 ALKBH8Q96BT7 664 aaKnown RBP9.66□□□□□ -0.86
TPM4-207ENST00000588032 MVB12AQ96EY5 273 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 EGFL8Q99944 293 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 RHOXF2Q9BQY4 288 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 CAPS2Q9BXY5 557 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 ADNPQ9H2P0 1102 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 CNOT10Q9H9A5 744 aaKnown RBP9.66□□□□□ -0.86
TPM4-207ENST00000588032 IFT80Q9P2H3 777 aaPredicted RBP9.66□□□□□ -0.86
TPM4-207ENST00000588032 DHCR7Q9UBM7 475 aaKnown RBP9.66□□□□□ -0.86
TPM4-207ENST00000588032 NDOR1Q9UHB4 597 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 ZNF180Q9UJW8 692 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 TLK1Q9UKI8 766 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 IKZF3Q9UKT9 509 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 TCFL5Q9UL49 500 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 MRPS18BQ9Y676 258 aaKnown RBP9.66□□□□□ -0.86
TPM4-207ENST00000588032 KCNE2Q9Y6J6 123 aa9.66□□□□□ -0.86
TPM4-207ENST00000588032 PRPF4O43172 522 aaKnown RBP eCLIP9.65□□□□□ -0.86
TPM4-207ENST00000588032 KRT38O76015 456 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 IPO13O94829 963 aaKnown RBP9.65□□□□□ -0.86
TPM4-207ENST00000588032 CTSBP07858 339 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 ABHD2P08910 425 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 LTA4HP09960 611 aaKnown RBP9.65□□□□□ -0.86
TPM4-207ENST00000588032 SLC35E2BP0CK96 405 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 PRKAR1AP10644 381 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 CNTFP26441 200 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 TYK2P29597 1187 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 GGT5P36269 586 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 MSH2P43246 934 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 CCR8P51685 355 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 CSNK1G2P78368 415 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 FAM53BQ14153 422 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 SSPNQ14714 243 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 EFTUD2Q15029 972 aaKnown RBP eCLIP9.65□□□□□ -0.865e-7■■■■□ 26.6
TPM4-207ENST00000588032 UAP1Q16222 522 aaPredicted RBP9.65□□□□□ -0.86
TPM4-207ENST00000588032 FAM83EQ2M2I3 478 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 ZXDCQ2QGD7 858 aaPredicted RBP9.65□□□□□ -0.86
TPM4-207ENST00000588032 LINC00303Q3SY05 128 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 SOWAHCQ53LP3 525 aaPredicted RBP9.65□□□□□ -0.86
TPM4-207ENST00000588032 MROH9Q5TGP6 573 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 C1orf189Q5VU69 101 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 MLIPQ5VWP3 458 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 SULT1C3Q6IMI6 304 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 MRPL14Q6P1L8 145 aaKnown RBP9.65□□□□□ -0.86
TPM4-207ENST00000588032 OVCH1Q7RTY7 1134 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 THOC6Q86W42 341 aaKnown RBP9.65□□□□□ -0.86
TPM4-207ENST00000588032 KLHDC8AQ8IYD2 350 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 CSNK1A1LQ8N752 337 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 OR4K1Q8NGD4 311 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 EXTL1Q92935 676 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 PTERQ96BW5 349 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 PYCR2Q96C36 320 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 RHBDF1Q96CC6 855 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 IP6K3Q96PC2 410 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 SARGQ9BW04 601 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 SLC26A1Q9H2B4 701 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 STARD5Q9NSY2 213 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 CUEDC1Q9NWM3 386 aaPredicted RBP9.65□□□□□ -0.86
TPM4-207ENST00000588032 TUBD1Q9UJT1 453 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 NXT1Q9UKK6 140 aaKnown RBP9.65□□□□□ -0.86
TPM4-207ENST00000588032 DYRK1BQ9Y463 629 aa9.65□□□□□ -0.86
TPM4-207ENST00000588032 PKD1L2Q7Z442 2459 aa9.64□□□□□ -0.87
TPM4-207ENST00000588032 ANKRD11Q6UB99 2663 aaPredicted RBP9.64□□□□□ -0.87
TPM4-207ENST00000588032 CDC14CA4D256 554 aa9.64□□□□□ -0.87
TPM4-207ENST00000588032 SYCE1LA8MT33 242 aa9.64□□□□□ -0.87
TPM4-207ENST00000588032 HAT1O14929 419 aa9.64□□□□□ -0.87
TPM4-207ENST00000588032 NRP2O60462 931 aa9.64□□□□□ -0.87
TPM4-207ENST00000588032 H2AFYO75367 372 aaKnown RBP9.64□□□□□ -0.87
TPM4-207ENST00000588032 KLF7O75840 302 aaPredicted RBP9.64□□□□□ -0.87
TPM4-207ENST00000588032 IGHEP01854 428 aa9.64□□□□□ -0.87
TPM4-207ENST00000588032 S100BP04271 92 aaPredicted RBP9.64□□□□□ -0.87
TPM4-207ENST00000588032 C2P06681 752 aa9.64□□□□□ -0.87
TPM4-207ENST00000588032 CDH1P12830 882 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms