RNA–Protein interactions for RNA: ENST00000582653.1

SHMT1-209, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 3

Gene SHMT1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-209ENST00000582653 ZNF282Q9UDV7 671 aaPredicted RBP19.5■□□□□ 0.71
SHMT1-209ENST00000582653 ASIC3Q9UHC3 531 aa19.5■□□□□ 0.71
SHMT1-209ENST00000582653 CES2O00748 559 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 DNALI1O14645 258 aaPredicted RBP19.49■□□□□ 0.71
SHMT1-209ENST00000582653 FFAR3O14843 346 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 GPR42O15529 346 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 ZGLP1P0C6A0 271 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 ENO3P13929 434 aaPredicted RBP19.49■□□□□ 0.71
SHMT1-209ENST00000582653 PGAM1P18669 254 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 TIAL1Q01085 375 aaKnown RBP eCLIP19.49■□□□□ 0.71
SHMT1-209ENST00000582653 KLC1Q07866 573 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 CRYMQ14894 314 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 RBBP7Q16576 425 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 MUM1Q2TAK8 710 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 VWA2Q5GFL6 755 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 HIST2H2BCQ6DN03 193 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 UBE2R2Q712K3 238 aaPredicted RBP19.49■□□□□ 0.71
SHMT1-209ENST00000582653 PLD3Q8IV08 490 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 IGDCC3Q8IVU1 814 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 CSNK1A1LQ8N752 337 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 C2CD4AQ8NCU7 369 aaPredicted RBP19.49■□□□□ 0.71
SHMT1-209ENST00000582653 DNAJB14Q8TBM8 379 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 EEF1AKMT1Q8WVE0 214 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 MIEF2Q96C03 454 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 OR2A5Q96R48 311 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 WDR77Q9BQA1 342 aaPredicted RBP19.49■□□□□ 0.71
SHMT1-209ENST00000582653 FAM167BQ9BTA0 163 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 CRB3Q9BUF7 120 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 AGPAT4Q9NRZ5 378 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 RUVBL1Q9Y265 456 aaKnown RBP19.49■□□□□ 0.71
SHMT1-209ENST00000582653 COMMD10Q9Y6G5 202 aa19.49■□□□□ 0.71
SHMT1-209ENST00000582653 IGLV3-12A0A075B6K2 115 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 ANKUB1A6NFN9 424 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 USP27XA6NNY8 438 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 ZNF839A8K0R7 811 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 VPS26AO75436 327 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 GABRB3P28472 473 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 IMPA1P29218 277 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 SKIV2L2P42285 1042 aaKnown RBP19.48■□□□□ 0.71
SHMT1-209ENST00000582653 PTK6Q13882 451 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 HIF1AQ16665 826 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 HP1BP3Q5SSJ5 553 aaPredicted RBP19.48■□□□□ 0.71
SHMT1-209ENST00000582653 THEMIS2Q5TEJ8 643 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 ATG9BQ674R7 924 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 ADCK2Q7Z695 626 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 LAPTM4BQ86VI4 370 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 THOC3Q96J01 351 aaKnown RBP19.48■□□□□ 0.71
SHMT1-209ENST00000582653 PWWP2AQ96N64 755 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 LMF1Q96S06 567 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 EBNA1BP2Q99848 306 aaKnown RBP19.48■□□□□ 0.71
SHMT1-209ENST00000582653 PCYOX1Q9UHG3 505 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 ERRFI1Q9UJM3 462 aaPredicted RBP19.48■□□□□ 0.71
SHMT1-209ENST00000582653 ADAMTS6Q9UKP5 1117 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 CDC14AQ9UNH5 594 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 NTNG1Q9Y2I2 539 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 CSAG2Q9Y5P2 127 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 ICE1Q9Y2F5 2266 aa19.48■□□□□ 0.71
SHMT1-209ENST00000582653 PCM1Q15154 2024 aa19.47■□□□□ 0.71
SHMT1-209ENST00000582653 H7BY64 318 aa19.47■□□□□ 0.71
SHMT1-209ENST00000582653 HAT1O14929 419 aa19.47■□□□□ 0.71
SHMT1-209ENST00000582653 CCNDBP1O95273 360 aa19.47■□□□□ 0.71
SHMT1-209ENST00000582653 STATHP02808 62 aa19.47■□□□□ 0.71
SHMT1-209ENST00000582653 FBLP22087 321 aaKnown RBP19.47■□□□□ 0.71
SHMT1-209ENST00000582653 RELAQ04206 551 aa19.47■□□□□ 0.71
SHMT1-209ENST00000582653 Q0VFX4 171 aa19.47■□□□□ 0.71
SHMT1-209ENST00000582653 ELOAQ14241 798 aaKnown RBP19.47■□□□□ 0.71
SHMT1-209ENST00000582653 BBS9Q3SYG4 887 aa19.47■□□□□ 0.71
SHMT1-209ENST00000582653 RBM20Q5T481 1227 aaKnown RBP19.47■□□□□ 0.71
SHMT1-209ENST00000582653 C8orf44Q96CB5 159 aa19.47■□□□□ 0.71
SHMT1-209ENST00000582653 MVB12AQ96EY5 273 aa19.47■□□□□ 0.71
SHMT1-209ENST00000582653 CAPZA3Q96KX2 299 aa19.47■□□□□ 0.71
SHMT1-209ENST00000582653 PRAP1Q96NZ9 151 aa19.47■□□□□ 0.71
SHMT1-209ENST00000582653 YIPF2Q9BWQ6 316 aa19.47■□□□□ 0.71
SHMT1-209ENST00000582653 UTP6Q9NYH9 597 aaKnown RBP19.47■□□□□ 0.71
SHMT1-209ENST00000582653 SLC17A6Q9P2U8 582 aa19.47■□□□□ 0.71
SHMT1-209ENST00000582653 TRMT6Q9UJA5 497 aaKnown RBP19.47■□□□□ 0.71
SHMT1-209ENST00000582653 NOVA2Q9UNW9 492 aaKnown RBP19.47■□□□□ 0.71
SHMT1-209ENST00000582653 SLC5A6Q9Y289 635 aa19.47■□□□□ 0.71
SHMT1-209ENST00000582653 P2RX6O15547 441 aa19.46■□□□□ 0.71
SHMT1-209ENST00000582653 HPP00738 406 aa19.46■□□□□ 0.71
SHMT1-209ENST00000582653 AHSGP02765 367 aa19.46■□□□□ 0.71
SHMT1-209ENST00000582653 EZRP15311 586 aaKnown RBP19.46■□□□□ 0.71
SHMT1-209ENST00000582653 IVDP26440 423 aa19.46■□□□□ 0.71
SHMT1-209ENST00000582653 CDKN2DP55273 166 aa19.46■□□□□ 0.71
SHMT1-209ENST00000582653 SNRPNP63162 240 aaKnown RBP19.46■□□□□ 0.71
SHMT1-209ENST00000582653 ABATP80404 500 aa19.46■□□□□ 0.71
SHMT1-209ENST00000582653 PAQR3Q6TCH7 311 aa19.46■□□□□ 0.71
SHMT1-209ENST00000582653 KLHL7Q8IXQ5 586 aa19.46■□□□□ 0.71
SHMT1-209ENST00000582653 SLCO2A1Q92959 643 aa19.46■□□□□ 0.71
SHMT1-209ENST00000582653 RERGQ96A58 199 aaPredicted RBP19.46■□□□□ 0.71
SHMT1-209ENST00000582653 MMABQ96EY8 250 aaPredicted RBP19.46■□□□□ 0.71
SHMT1-209ENST00000582653 EPS8L2Q9H6S3 715 aa19.46■□□□□ 0.71
SHMT1-209ENST00000582653 PLAC1Q9HBJ0 212 aa19.46■□□□□ 0.71
SHMT1-209ENST00000582653 TRPC4Q9UBN4 977 aa19.46■□□□□ 0.71
SHMT1-209ENST00000582653 C3orf18Q9UK00 162 aa19.46■□□□□ 0.71
SHMT1-209ENST00000582653 PDE10AQ9Y233 779 aa19.46■□□□□ 0.71
SHMT1-209ENST00000582653 NUP210LQ5VU65 1888 aa19.45■□□□□ 0.7
SHMT1-209ENST00000582653 FOXS1O43638 330 aa19.45■□□□□ 0.7
SHMT1-209ENST00000582653 LDLRP01130 860 aa19.45■□□□□ 0.7
SHMT1-209ENST00000582653 ACPPP15309 386 aa19.45■□□□□ 0.7
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