RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 B3GNT3Q9Y2A9 372 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 MAST4O15021 2626 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 NAV2Q8IVL1 2488 aa20.28■□□□□ 0.84
CSNK1D-215ENST00000580784 H7BY64 318 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 FFAR3O14843 346 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 GPR42O15529 346 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 IPO13O94829 963 aaKnown RBP20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 TTC4O95801 387 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 AHSGP02765 367 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 EZRP15311 586 aaKnown RBP20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 FBLP22087 321 aaKnown RBP20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 CARSP49589 748 aaKnown RBP20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 BBS9Q3SYG4 887 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 TUBB8Q3ZCM7 444 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 SPANXN3Q5MJ09 141 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 HP1BP3Q5SSJ5 553 aaPredicted RBP20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 UGT3A1Q6NUS8 523 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 ADCK2Q7Z695 626 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 LAPTM4BQ86VI4 370 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 ZADH2Q8N4Q0 377 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 C19orf60Q96EN9 201 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 CAPZA3Q96KX2 299 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 PWWP2AQ96N64 755 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 PRAP1Q96NZ9 151 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 CDC14AQ9UNH5 594 aa20.27■□□□□ 0.84
CSNK1D-215ENST00000580784 IGLV3-12A0A075B6K2 115 aa20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 TCP11X1B4DZS4 312 aa20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 EIF3FO00303 357 aaPredicted RBP20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 HAT1O14929 419 aa20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 CDKN2DP55273 166 aa20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 RELAQ04206 551 aa20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 RBM20Q5T481 1227 aaKnown RBP20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 PAQR3Q6TCH7 311 aa20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 KLHL7Q8IXQ5 586 aa20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 CISD2Q8N5K1 135 aaKnown RBP20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 MCOLN3Q8TDD5 553 aa20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 RERGQ96A58 199 aaPredicted RBP20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 SNRNP40Q96DI7 357 aaKnown RBP20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 NAT9Q9BTE0 207 aa20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 YIPF2Q9BWQ6 316 aa20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 PLAC1Q9HBJ0 212 aa20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 TAS2R13Q9NYV9 303 aa20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 SLC17A6Q9P2U8 582 aa20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 TRPC4Q9UBN4 977 aa20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 C3orf18Q9UK00 162 aa20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 PDE10AQ9Y233 779 aa20.26■□□□□ 0.83
CSNK1D-215ENST00000580784 SPTAN1Q13813 2472 aaKnown RBP20.25■□□□□ 0.83
CSNK1D-215ENST00000580784 P2RX6O15547 441 aa20.25■□□□□ 0.83
CSNK1D-215ENST00000580784 Q0VFX4 171 aa20.25■□□□□ 0.83
CSNK1D-215ENST00000580784 DSG2Q14126 1118 aa20.25■□□□□ 0.83
CSNK1D-215ENST00000580784 CREG2Q8IUH2 290 aa20.25■□□□□ 0.83
CSNK1D-215ENST00000580784 CNTN4Q8IWV2 1026 aa20.25■□□□□ 0.83
CSNK1D-215ENST00000580784 IQCKQ8N0W5 287 aa20.25■□□□□ 0.83
CSNK1D-215ENST00000580784 ARHGEF39Q8N4T4 335 aa20.25■□□□□ 0.83
CSNK1D-215ENST00000580784 GABPB2Q8TAK5 448 aaPredicted RBP20.25■□□□□ 0.83
CSNK1D-215ENST00000580784 TM9SF4Q92544 642 aa20.25■□□□□ 0.83
CSNK1D-215ENST00000580784 C8orf44Q96CB5 159 aa20.25■□□□□ 0.83
CSNK1D-215ENST00000580784 MVB12AQ96EY5 273 aa20.25■□□□□ 0.83
CSNK1D-215ENST00000580784 MMABQ96EY8 250 aaPredicted RBP20.25■□□□□ 0.83
CSNK1D-215ENST00000580784 CERS2Q96G23 380 aa20.25■□□□□ 0.83
CSNK1D-215ENST00000580784 ILKAPQ9H0C8 392 aaPredicted RBP20.25■□□□□ 0.83
CSNK1D-215ENST00000580784 SCN3AQ9NY46 2000 aa20.25■□□□□ 0.83
CSNK1D-215ENST00000580784 A0A0A6YYC8 382 aaPredicted RBP20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 I3L1I5 382 aaPredicted RBP20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 FOXS1O43638 330 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 STATHP02808 62 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 VARSP26640 1264 aaKnown RBP20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 SLC26A3P40879 764 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 ELK3P41970 407 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 RGS4P49798 205 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 PGGT1BP53609 377 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 GNG11P61952 73 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 TBPL1P62380 186 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 SNRPNP63162 240 aaKnown RBP20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 HIF1AQ16665 826 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 TEDDM1Q5T9Z0 273 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 GARNL3Q5VVW2 1013 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 ATG9BQ674R7 924 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 LRRC8EQ6NSJ5 796 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 MBOAT1Q6ZNC8 495 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 Q6ZS92 163 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 AMER3Q8N944 861 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 THOC3Q96J01 351 aaKnown RBP20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 VPS50Q96JG6 964 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 CCDC138Q96M89 665 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 LHPPQ9H008 270 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 ATG10Q9H0Y0 220 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 PARVBQ9HBI1 364 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 PPANQ9NQ55 473 aaKnown RBP20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 CCDC177Q9NQR7 707 aaPredicted RBP20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 TMEM184CQ9NVA4 438 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 ASF1BQ9NVP2 202 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 CSAG2Q9Y5P2 127 aa20.24■□□□□ 0.83
CSNK1D-215ENST00000580784 SPTBN1Q01082 2364 aaKnown RBP20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 HIVEP3Q5T1R4 2406 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 TXNDC9O14530 226 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 C8GP07360 202 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 ACPPP15309 386 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 MRPL49Q13405 166 aaKnown RBP20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 MORF4L2Q15014 288 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms