RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 C1orf189Q5VU69 101 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 PRAMEF13Q5VWM6 474 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 FRMPD2BQ6IN97 320 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 MRPL14Q6P1L8 145 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 CLEC18BQ6UXF7 455 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 CTAGE6Q86UF2 777 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 CCDC25Q86WR0 208 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 CEP97Q8IW35 865 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 CTAGE4Q8IX94 777 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 OR4N4Q8N0Y3 316 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 FAM26EQ8N5C1 309 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 NOA1Q8NC60 698 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 CLEC18CQ8NCF0 446 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 OR56A3Q8NH54 315 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 ATL1Q8WXF7 558 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 FKBP10Q96AY3 582 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 FBXL8Q96CD0 374 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 TSPAN17Q96FV3 270 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 OR2A5Q96R48 311 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 GPR22Q99680 433 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 RBBP8Q99708 897 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 TSPYL1Q9H0U9 437 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 CUTCQ9NTM9 273 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 TMEM184CQ9NVA4 438 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 ARL15Q9NXU5 204 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 IFT80Q9P2H3 777 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 GPN3Q9UHW5 284 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 MAN2B2Q9Y2E5 1009 aa13.04□□□□□ -0.32
CSNK1D-208ENST00000578501 PCM1Q15154 2024 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 H0YGG7 62 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 TXNDC9O14530 226 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 PIAS1O75925 651 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 ALBP02768 609 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 ITGAXP20702 1163 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 SAT1P21673 171 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 PMS2P54278 862 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 SLC12A2P55011 1212 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 ARF3P61204 181 aaPredicted RBP13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 FOXK1P85037 733 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 CDKL1Q00532 357 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 NAE1Q13564 534 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 SSPNQ14714 243 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 PPP1R3AQ16821 1122 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 KBTBD12Q3ZCT8 623 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 GRTP1Q5TC63 336 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 CAPN13Q6MZZ7 669 aaPredicted RBP13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 PRMT9Q6P2P2 845 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 LCTLQ6UWM7 567 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 MBOAT1Q6ZNC8 495 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 TTLL10Q6ZVT0 673 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 OVCH1Q7RTY7 1134 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 PSMG3-AS1Q96PY0 264 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 HAUS8Q9BT25 410 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 DERL2Q9GZP9 239 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 ATG10Q9H0Y0 220 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 GPAMQ9HCL2 828 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 SLC22A11Q9NSA0 550 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 MTRF1LQ9UGC7 380 aaKnown RBP13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 NDOR1Q9UHB4 597 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 DMGDHQ9UI17 866 aaKnown RBP13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 ANAPC2Q9UJX6 822 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 MTO1Q9Y2Z2 717 aaKnown RBP13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 SEC16AO15027 2179 aa13.03□□□□□ -0.32
CSNK1D-208ENST00000578501 USP9XQ93008 2570 aaPredicted RBP13.02□□□□□ -0.32
CSNK1D-208ENST00000578501 KCNE1BA0A087WTH5 132 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 H7BY64 318 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 NPPBP16860 134 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 STMN1P16949 149 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 SPRP35270 261 aaPredicted RBP13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 CASRP41180 1078 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 ZNF460Q14592 562 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 USP10Q14694 798 aaKnown RBP13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 ZXDCQ2QGD7 858 aaPredicted RBP13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 MUM1Q2TAK8 710 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 GARNL3Q5VVW2 1013 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 MLIPQ5VWP3 458 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 C17orf64Q86WR6 236 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 CTAGE3PQ8IX95 158 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 CSNK1A1LQ8N752 337 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 CEP112Q8N8E3 955 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 ABHD11Q8NFV4 315 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 OR2Y1Q8NGV0 311 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 FBF1Q8TES7 1133 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 ANKRD49Q8WVL7 239 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 RERGQ96A58 199 aaPredicted RBP13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 NACC2Q96BF6 587 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 THAP11Q96EK4 314 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 MVB12AQ96EY5 273 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 PRAP1Q96NZ9 151 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 IP6K3Q96PC2 410 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 EPN3Q9H201 632 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 SLC26A1Q9H2B4 701 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 WDR54Q9H977 334 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 ABCF3Q9NUQ8 709 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 CUEDC1Q9NWM3 386 aaPredicted RBP13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 IKZF3Q9UKT9 509 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 OARD1Q9Y530 152 aa13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 TLN1Q9Y490 2541 aaKnown RBP13.02□□□□□ -0.33
CSNK1D-208ENST00000578501 CDC7O00311 574 aa13.01□□□□□ -0.33
CSNK1D-208ENST00000578501 HAT1O14929 419 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms