RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 ALG9Q9H6U8 611 aa13.31□□□□□ -0.28
SNORD3B-1-201ENST00000577988 LHX9Q9NQ69 397 aa13.31□□□□□ -0.28
SNORD3B-1-201ENST00000577988 ABCF3Q9NUQ8 709 aa13.31□□□□□ -0.28
SNORD3B-1-201ENST00000577988 IRAK4Q9NWZ3 460 aa13.31□□□□□ -0.28
SNORD3B-1-201ENST00000577988 GPRC5BQ9NZH0 403 aa13.31□□□□□ -0.28
SNORD3B-1-201ENST00000577988 KCND3Q9UK17 655 aa13.31□□□□□ -0.28
SNORD3B-1-201ENST00000577988 PTBP2Q9UKA9 531 aaKnown RBP13.31□□□□□ -0.28
SNORD3B-1-201ENST00000577988 FRYQ5TBA9 3013 aa13.31□□□□□ -0.28
SNORD3B-1-201ENST00000577988 A0A0J9YVX5 310 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 C21orf140B9A014 251 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 MEN1O00255 615 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 MAP2K7O14733 419 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 HCRTR1O43613 425 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 STK16O75716 305 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 RECKO95980 971 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 NUDT17P0C025 328 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 AGXTP21549 392 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 ITPKBP27987 946 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 RORAP35398 523 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 HSD17B3P37058 310 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 GCGRP47871 477 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 KCNC1P48547 511 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 CCR8P51685 355 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 YBX1P67809 324 aaKnown RBP13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 CSNK1G2P78368 415 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 DEFB110Q30KQ9 67 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 WASHC2DQ5SRD0 308 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 GARNL3Q5VVW2 1013 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 CCDC81Q6ZN84 652 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 ADCK2Q7Z695 626 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 DSELQ8IZU8 1212 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 MREGQ8N565 214 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 ZSCAN1Q8NBB4 408 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 SLC5A11Q8WWX8 675 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 RERGQ96A58 199 aaPredicted RBP13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 PYCR2Q96C36 320 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 GPR78Q96P69 363 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 OR2A5Q96R48 311 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 OR4K3Q96R72 315 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 GPR87Q9BY21 358 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 NLNQ9BYT8 704 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 ROPN1BQ9BZX4 212 aaPredicted RBP13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 UNKQ9C0B0 810 aaKnown RBP13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 PITHD1Q9GZP4 211 aaPredicted RBP13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 GPN2Q9H9Y4 310 aaPredicted RBP13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 ROPN1Q9HAT0 212 aaPredicted RBP13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 PELI2Q9HAT8 420 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 TXLNGQ9NUQ3 528 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 CUEDC1Q9NWM3 386 aaPredicted RBP13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 WWOXQ9NZC7 414 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 SLC22A14Q9Y267 594 aa13.3□□□□□ -0.28
SNORD3B-1-201ENST00000577988 EPG5Q9HCE0 2579 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 H0YGG7 62 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 KLK8O60259 260 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 CDH16O75309 829 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 H2AFYO75367 372 aaKnown RBP13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 RFPL1O75677 317 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 ONECUT2O95948 504 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 RAB40ALP0C0E4 278 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 PIM1P11309 404 aaPredicted RBP13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 GNAZP19086 355 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 CXCR2P25025 360 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 VSX2P58304 361 aaPredicted RBP13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 ARF3P61204 181 aaPredicted RBP13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 IRF9Q00978 393 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 MC1RQ01726 317 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 VAC14Q08AM6 782 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 GPS2Q13227 327 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 MUM1Q2TAK8 710 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 PRTGQ2VWP7 1150 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 CRTC2Q53ET0 693 aaPredicted RBP13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 LRRC70Q7Z2Q7 622 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 RIBC1Q8N443 379 aaPredicted RBP13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 ZNF655Q8N720 491 aaPredicted RBP13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 MR1Q95460 341 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 SLC45A3Q96JT2 553 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 MRPL57Q9BQC6 102 aaKnown RBP13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 AIF1LQ9BQI0 150 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 EHD1Q9H4M9 534 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 PCMTD2Q9NV79 361 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 DNAJC11Q9NVH1 559 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.29□□□□□ -0.281e-15■■■■■ 220.2
SNORD3B-1-201ENST00000577988 PCDHGA6Q9Y5G7 932 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 TNPO3Q9Y5L0 923 aaKnown RBP13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 V9GYY5 206 aaPredicted RBP13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 DMXL2Q8TDJ6 3036 aa13.29□□□□□ -0.28
SNORD3B-1-201ENST00000577988 LOC105369274A0A096LPK9 316 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 LOC102723532A0A0G2JNH3 316 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 LOC101059948A0A1B0GTJ6 334 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 TRBC2A0A5B9 178 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 NCF1BA6NI72 391 aaPredicted RBP13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 NCF1CA8MVU1 366 aaPredicted RBP13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 SUPT3HB4E1H0 165 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 K7ENP7 123 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 TAPBPO15533 448 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 SUPT3HO75486 399 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 WDR47O94967 919 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 GSTA1P08263 222 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 CDH1P12830 882 aa13.28□□□□□ -0.28
SNORD3B-1-201ENST00000577988 MTHFD2P13995 350 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms