RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 AMIGO3Q86WK7 504 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 RAVER1Q8IY67 606 aaKnown RBP12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 TMEM130Q8N3G9 435 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 ZNF433Q8N7K0 673 aaPredicted RBP12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 IMP4Q96G21 291 aaKnown RBP12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 RACGAP1Q9H0H5 632 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 SMOC2Q9H3U7 446 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 FAM120CQ9NX05 1096 aaKnown RBP12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 WNT9AO14904 365 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 EPOP01588 193 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 OMPP47874 163 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 AP3S2P59780 193 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 AP1S1P61966 158 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 RGL4Q8IZJ4 473 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 PAPD5Q8NDF8 572 aaKnown RBP12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 FAM46DQ8NEK8 389 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 RHOXF1Q8NHV9 184 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 BPIFB1Q8TDL5 484 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 TIFAQ96CG3 184 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 IL12RB2Q99665 862 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 SLC35A5Q9BS91 424 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 MROQ9BYG7 248 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 UCK2Q9BZX2 261 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 ZNF451Q9Y4E5 1061 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 TCRBV5S1A1TA0A578 114 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 HMX2A2RU54 273 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 ISM1B1AKI9 464 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 BEST1O76090 585 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 FDXRP22570 491 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 STOMP27105 288 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 MAGEA3P43357 314 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 MAP2K3P46734 347 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 SCAPQ12770 1279 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 ADAM15Q13444 863 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 ZNF613Q6PF04 617 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 GPR142Q7Z601 462 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 JPH3Q8WXH2 748 aaPredicted RBP12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 C3orf30Q96M34 536 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 POLE3Q9NRF9 147 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 GTF2IRD1Q9UHL9 959 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 ASF1AQ9Y294 204 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 PCDHGA4Q9Y5G9 962 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 AGAP5A6NIR3 686 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 PIRO00625 290 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 PLD2O14939 933 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 PCDH7O60245 1069 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 FOXA1P55317 472 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 CDK6Q00534 326 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 AGAP7PQ5VUJ5 663 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 PPP2R2DQ66LE6 453 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 DPY19L3Q6ZPD9 716 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 DCP2Q8IU60 420 aaKnown RBP12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 OXR1Q8N573 874 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 CLDN19Q8N6F1 224 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 OR52B6Q8NGF0 335 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 TRPM4Q8TD43 1214 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 EXOSC8Q96B26 276 aaKnown RBP12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 CRTAC1Q9NQ79 661 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 CTPS2Q9NRF8 586 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 FCF1Q9Y324 198 aaKnown RBP12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 TLX2O43763 284 aaPredicted RBP12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 MAFKO60675 156 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 KCNE1P15382 129 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 ADNP2Q6IQ32 1131 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 SLITRK4Q8IW52 837 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 GALNT6Q8NCL4 622 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 LILRB4Q8NHJ6 448 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 TNFAIP8L1Q8WVP5 186 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 GMPR2Q9P2T1 348 aaKnown RBP12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 TRPS1Q9UHF7 1281 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 A0A1W2PRB8 838 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 H3BM21 787 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 REM1O75628 298 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 CKBP12277 381 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 PSMA3P25788 255 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 LRRC66Q68CR7 880 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 FAM220AQ7Z4H9 259 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 SPRED1Q7Z699 444 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 RETREG3Q86VR2 466 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 LSMEM2Q8N112 164 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 PNPLA1Q8N8W4 532 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 KAT2AQ92830 837 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 DPAGT1Q9H3H5 408 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 MTMR10Q9NXD2 777 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 POU2F3Q9UKI9 436 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 A0A1B0GTW7 788 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 OR2AG2A6NM03 316 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 CHURC1-FNTBB4DL54 471 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 AKAP8O43823 692 aaKnown RBP12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 SOX14O95416 240 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 CKMT1AP12532 417 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 SHMT2P34897 504 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 ARHGAP1Q07960 439 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 C9orf64Q5T6V5 341 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 ZDHHC20Q5W0Z9 365 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 SHQ1Q6PI26 577 aaKnown RBP12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 C14orf80Q86SX3 495 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 CLEC14AQ86T13 490 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 PIGXQ8TBF5 258 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 SMG7Q92540 1137 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms