RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 PRTGQ2VWP7 1150 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 TEDDM1Q5T9Z0 273 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 VWA5B1Q5TIE3 1220 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 PRAMEF13Q5VWM6 474 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 ZNF425Q6IV72 752 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 JMJD6Q6NYC1 403 aaPredicted RBP12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 MBOAT1Q6ZNC8 495 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 KIAA0408Q6ZU52 694 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 HPS6Q86YV9 775 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 CNTN4Q8IWV2 1026 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 MIEF2Q96C03 454 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 MMABQ96EY8 250 aaPredicted RBP12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 HIST1H2AHQ96KK5 128 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 C10orf90Q96M02 699 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 CCDC138Q96M89 665 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 PRAP1Q96NZ9 151 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 SMAD5Q99717 465 aaKnown RBP12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 HIST1H2AJQ99878 128 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 ERP44Q9BS26 406 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 H2AFJQ9BTM1 129 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 ATG10Q9H0Y0 220 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 SLC26A1Q9H2B4 701 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 SYNPO2LQ9H987 977 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 ENAMQ9NRM1 1142 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 ZNF282Q9UDV7 671 aaPredicted RBP12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 CDC14AQ9UNH5 594 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 PDE10AQ9Y233 779 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 RUVBL1Q9Y265 456 aaKnown RBP12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 TEX264Q9Y6I9 313 aa12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 SPENQ96T58 3664 aaKnown RBP12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 SNRNP200O75643 2136 aaKnown RBP12.11□□□□□ -0.47
NPLOC4-213ENST00000573519 SPTBP11277 2137 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 SOCS6O14544 535 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 PRPF4O43172 522 aaKnown RBP eCLIP12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 KLHL41O60662 606 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 VPS4BO75351 444 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 ONECUT2O95948 504 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 ANXA5P08758 320 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 ZGLP1P0C6A0 271 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 SAT1P21673 171 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 PGGT1BP53609 377 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 IL2P60568 153 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 KLC1Q07866 573 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 AIMP2Q13155 320 aaKnown RBP12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 SP140Q13342 867 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 MYBPC3Q14896 1274 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 TUBB8Q3ZCM7 444 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 VWA2Q5GFL6 755 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 HECTD2Q5U5R9 776 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 IRAK1BP1Q5VVH5 260 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 STEAP4Q687X5 459 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 SLC6A19Q695T7 634 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 AGTRAPQ6RW13 159 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 MAATS1Q7Z4T9 603 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 LRRC56Q8IYG6 542 aaPredicted RBP12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 RBMXL3Q8N7X1 1067 aaKnown RBP12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 FBXO36Q8NEA4 188 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 STT3BQ8TCJ2 826 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 LRRC39Q96DD0 335 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 OR2A5Q96R48 311 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 PARVBQ9HBI1 364 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 SEMA3GQ9NS98 782 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 ZFATQ9P243 1243 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 C5AR2Q9P296 337 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 TRPC4Q9UBN4 977 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 VPS4AQ9UN37 437 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 HS3ST3B1Q9Y662 390 aa12.1□□□□□ -0.47
NPLOC4-213ENST00000573519 A0A0A6YYC8 382 aaPredicted RBP12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 VSTM2BA6NLU5 285 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 I3L1I5 382 aaPredicted RBP12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 TXNDC9O14530 226 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 SLC16A5O15375 505 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 IPO13O94829 963 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 SORBS2O94875 1100 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 NAE1Q13564 534 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 TRADDQ15628 312 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 PHKG1Q16816 387 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 DUPD1Q68J44 220 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 FAM45BPQ6NSW5 357 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 KIRREL2Q6UWL6 708 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 CAPN12Q6ZSI9 719 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 PARP9Q8IXQ6 854 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 FAM45AQ8TCE6 357 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 TM9SF4Q92544 642 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 ZNF592Q92610 1267 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 NACC2Q96BF6 587 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 VPS50Q96JG6 964 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 DRC3Q9H069 523 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 ILKAPQ9H0C8 392 aaPredicted RBP12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 PCBD2Q9H0N5 130 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 ZNF552Q9H707 407 aaPredicted RBP12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 TMEM184CQ9NVA4 438 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 ARL15Q9NXU5 204 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 GRHL1Q9NZI5 618 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 C3orf18Q9UK00 162 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 VWA7Q9Y334 891 aa12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 UBR5O95071 2799 aaPredicted RBP12.09□□□□□ -0.47
NPLOC4-213ENST00000573519 FER1L5A0AVI2 2057 aa12.08□□□□□ -0.48
NPLOC4-213ENST00000573519 E7ESA3 106 aa12.08□□□□□ -0.48
NPLOC4-213ENST00000573519 MAP2K7O14733 419 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms