RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 SLC25A35Q3KQZ1 300 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 ANKRD20A8PQ5CZ79 823 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 CCDC122Q5T0U0 273 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 GPRC6AQ5T6X5 926 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 FCRLBQ6BAA4 426 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 SLC25A25Q6KCM7 469 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 TRIM73Q86UV7 250 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 HOOK3Q86VS8 718 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 SLC35F6Q8N357 371 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 TRAM1L1Q8N609 369 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 METTL27Q8N6F8 245 aaPredicted RBP6.53□□□□□ -1.36
CHD3-213ENST00000571249 OR5M9Q8NGP3 310 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 JOSD2Q8TAC2 188 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 CCHCR1Q8TD31 782 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 LCN9Q8WX39 176 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 DLG3Q92796 817 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 KIAA1191Q96A73 305 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 ZMYND19Q96E35 227 aaPredicted RBP6.53□□□□□ -1.36
CHD3-213ENST00000571249 ZNF599Q96NL3 588 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 CCL19Q99731 98 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 NAPGQ99747 312 aaPredicted RBP6.53□□□□□ -1.36
CHD3-213ENST00000571249 SH3GL2Q99962 352 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 ARPC5LQ9BPX5 153 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 MGME1Q9BQP7 344 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 TTYH2Q9BSA4 534 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 YIPF4Q9BSR8 244 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 CRACR2AQ9BSW2 395 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 NUP85Q9BW27 656 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 REG4Q9BYZ8 158 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 BHLHE41Q9C0J9 482 aaPredicted RBP6.53□□□□□ -1.36
CHD3-213ENST00000571249 LACRTQ9GZZ8 138 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 ATG10Q9H0Y0 220 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 NLRC4Q9NPP4 1024 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 LUC7LQ9NQ29 371 aaKnown RBP6.53□□□□□ -1.36
CHD3-213ENST00000571249 INTUQ9ULD6 942 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 CHKBQ9Y259 395 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 DSCAMO60469 2012 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 RYR1P21817 5038 aa6.53□□□□□ -1.36
CHD3-213ENST00000571249 MED12Q93074 2177 aa6.52□□□□□ -1.36
CHD3-213ENST00000571249 CADP27708 2225 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 IGHV1-45A0A0A0MS14 117 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 C2CD4BA6NLJ0 364 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 C2orf74A8MZ97 194 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 CES2O00748 559 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 GPRIN2O60269 458 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 SUSD5O60279 629 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 MATN4O95460 622 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 PEX11BO96011 259 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 SP1P08047 785 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 CYP11B1P15538 503 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 NDUFS1P28331 727 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 PBLDP30039 288 aaPredicted RBP6.52□□□□□ -1.37
CHD3-213ENST00000571249 CDH5P33151 784 aaPredicted RBP6.52□□□□□ -1.37
CHD3-213ENST00000571249 RFC3P40938 356 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 MAGEA1P43355 309 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 PTPN9P43378 593 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 ARSFP54793 590 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 WDR4P57081 412 aaKnown RBP6.52□□□□□ -1.37
CHD3-213ENST00000571249 KLHL30Q0D2K2 578 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 TMEM115Q12893 351 aaPredicted RBP6.52□□□□□ -1.37
CHD3-213ENST00000571249 PIN1Q13526 163 aaPredicted RBP6.52□□□□□ -1.37
CHD3-213ENST00000571249 FASTKQ14296 549 aaKnown RBP6.52□□□□□ -1.37
CHD3-213ENST00000571249 MESDQ14696 234 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 MLC1Q15049 377 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 MAPKAPK3Q16644 382 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 GXYLT1Q4G148 440 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 ATP13A4Q4VNC1 1196 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 RALGPS1Q5JS13 557 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 PRR31Q5SQ13 230 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 RTL6Q6ICC9 239 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 ARHGEF18Q6ZSZ5 1173 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 IL17RELQ6ZVW7 336 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 NLRP9Q7RTR0 991 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 KIAA1328Q86T90 577 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 ZBTB46Q86UZ6 589 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 BBS5Q8N3I7 341 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 DTWD1Q8N5C7 304 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.52□□□□□ -1.37
CHD3-213ENST00000571249 NPWQ8N729 165 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 GPR26Q8NDV2 337 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 LPCAT1Q8NF37 534 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 TRIM58Q8NG06 486 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 SVIPQ8NHG7 77 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 SLC22A8Q8TCC7 542 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 STT3BQ8TCJ2 826 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 KISS1RQ969F8 398 aaPredicted RBP6.52□□□□□ -1.37
CHD3-213ENST00000571249 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.52□□□□□ -1.37
CHD3-213ENST00000571249 MIEF2Q96C03 454 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 ZBED6CLQ96FA7 236 aaPredicted RBP6.52□□□□□ -1.37
CHD3-213ENST00000571249 LYSMD1Q96S90 227 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 UTP23Q9BRU9 249 aaKnown RBP6.52□□□□□ -1.37
CHD3-213ENST00000571249 ZSCAN5AQ9BUG6 496 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 GSX2Q9BZM3 304 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 ZFAND3Q9H8U3 227 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 PNPLA3Q9NST1 481 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 RIC8BQ9NVN3 520 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 FZD10Q9ULW2 581 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 PLCL2Q9UPR0 1127 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 SPEF1Q9Y4P9 236 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 FAM215AQ9Y5M1 114 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms