RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 STX16O14662 325 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 HAT1O14929 419 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 NVLO15381 856 aaKnown RBP12.52□□□□□ -0.41
CNOT1-217ENST00000569263 KLK8O60259 260 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 NRP2O60462 931 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 CTSVO60911 334 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 SPAG7O75391 227 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 OR2B3O76000 313 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 FGF5P12034 268 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 EEF1DP29692 281 aaKnown RBP12.52□□□□□ -0.41
CNOT1-217ENST00000569263 SLC5A2P31639 672 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 PIK3CGP48736 1102 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 ERVPABLB-1P60509 514 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 CSNK1G2P78368 415 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 TBC1D25Q3MII6 688 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.52□□□□□ -0.41
CNOT1-217ENST00000569263 CATSPEREQ5SY80 951 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 UNQ6494/PRO21346Q6UXR6 183 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 HDXQ7Z353 690 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 PLD3Q8IV08 490 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 MCATQ8IVS2 390 aaKnown RBP12.52□□□□□ -0.41
CNOT1-217ENST00000569263 TEX9Q8N6V9 391 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 OR1L3Q8NH93 324 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 MDM1Q8TC05 714 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 RERGQ96A58 199 aaPredicted RBP12.52□□□□□ -0.41
CNOT1-217ENST00000569263 PGM2Q96G03 612 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 ULBP3Q9BZM4 244 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 B3GNT4Q9C0J1 378 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 SLC7A5P2Q9GIP4 190 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 MKS1Q9NXB0 559 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 GPRC5BQ9NZH0 403 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 FOXJ2Q9P0K8 574 aa12.52□□□□□ -0.41
CNOT1-217ENST00000569263 A8MT66 165 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 H2AFYO75367 372 aaKnown RBP12.51□□□□□ -0.41
CNOT1-217ENST00000569263 SCRG1O75711 98 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 SIX3O95343 332 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-217ENST00000569263 PROCP04070 461 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 EIF2S1P05198 315 aaKnown RBP12.51□□□□□ -0.41
CNOT1-217ENST00000569263 SBK3P0C264 359 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 MYL2P10916 166 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 EPB42P16452 691 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 ATP5F1P24539 256 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-217ENST00000569263 CD82P27701 267 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 GABRA4P48169 554 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 VSX2P58304 361 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-217ENST00000569263 RPS15AP62244 130 aaKnown RBP12.51□□□□□ -0.41
CNOT1-217ENST00000569263 PCBP2Q15366 365 aaKnown RBP eCLIP12.51□□□□□ -0.412e-7■■□□□ 12
CNOT1-217ENST00000569263 TCTE1Q5JU00 501 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 NXPE4Q6UWF7 544 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 SLC22A9Q8IVM8 553 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 BANPQ8N9N5 519 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 TTC29Q8NA56 475 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-217ENST00000569263 ABHD11Q8NFV4 315 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 RDH11Q8TC12 318 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 CCDC126Q96EE4 140 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 RNF31Q96EP0 1072 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 FCRL4Q96PJ5 515 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 AIF1LQ9BQI0 150 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 EMCNQ9ULC0 261 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 ASB1Q9Y576 335 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 NCOR2Q9Y618 2525 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 AKAP13Q12802 2813 aa12.51□□□□□ -0.41
CNOT1-217ENST00000569263 FEZF1A0PJY2 475 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 LRRC14BA6NHZ5 514 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 C1QTNF9BB2RNN3 333 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 HCRTR1O43613 425 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 PLIN3O60664 434 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 SRPX2O60687 465 aaPredicted RBP12.5□□□□□ -0.41
CNOT1-217ENST00000569263 CPNE3O75131 537 aaKnown RBP12.5□□□□□ -0.41
CNOT1-217ENST00000569263 KATNA1O75449 491 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 STK17BO94768 372 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 KIAA0754O94854 1291 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 C1QTNF9P0C862 333 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 C1GALT1C1LP0DN25 315 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 CXCR2P25025 360 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 VARSP26640 1264 aaKnown RBP12.5□□□□□ -0.41
CNOT1-217ENST00000569263 ARL1P40616 181 aaPredicted RBP12.5□□□□□ -0.41
CNOT1-217ENST00000569263 PCBP4P57723 403 aaKnown RBP12.5□□□□□ -0.41
CNOT1-217ENST00000569263 NFKB2Q00653 900 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 REEP5Q00765 189 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 MEF2AQ02078 507 aaPredicted RBP12.5□□□□□ -0.41
CNOT1-217ENST00000569263 IRF8Q02556 426 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 RELAQ04206 551 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 GTF2H2Q13888 395 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 XKR6Q5GH73 641 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 ATG9BQ674R7 924 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 FRMPD2BQ6IN97 320 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 PWWP2BQ6NUJ5 590 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 GTF2H2CQ6P1K8 395 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 METTL2BQ6P1Q9 378 aaKnown RBP12.5□□□□□ -0.41
CNOT1-217ENST00000569263 TLDC1Q6P9B6 456 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 ZYG11AQ6WRX3 759 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 TMEM151AQ8N4L1 468 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 PPP4R1Q8TF05 950 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 NDC1Q9BTX1 674 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 TMEM121BQ9BXQ6 578 aaPredicted RBP12.5□□□□□ -0.41
CNOT1-217ENST00000569263 NLNQ9BYT8 704 aa12.5□□□□□ -0.41
CNOT1-217ENST00000569263 SPRTNQ9H040 489 aaPredicted RBP12.5□□□□□ -0.41
CNOT1-217ENST00000569263 C12orf65Q9H3J6 166 aaKnown RBP12.5□□□□□ -0.41
CNOT1-217ENST00000569263 ACTR5Q9H9F9 607 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms