RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 NAA25Q14CX7 972 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 FASTKD3Q14CZ7 662 aaKnown RBP13.96□□□□□ -0.17
FANCA-220ENST00000566409 PHKG1Q16816 387 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 CLEC18BQ6UXF7 455 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 ANKMY2Q8IV38 441 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 CSNK1A1LQ8N752 337 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 CLEC18CQ8NCF0 446 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 NACC2Q96BF6 587 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 PRAP1Q96NZ9 151 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 OLFM1Q99784 485 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 TRIM31Q9BZY9 425 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 ZBTB20Q9HC78 741 aaPredicted RBP13.96□□□□□ -0.17
FANCA-220ENST00000566409 TAS2R13Q9NYV9 303 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 LUZP4Q9P127 313 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 CDC23Q9UJX2 597 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 FBXL4Q9UKA2 621 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 IKZF3Q9UKT9 509 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 PSAT1Q9Y617 370 aa13.96□□□□□ -0.17
FANCA-220ENST00000566409 IGLV3-12A0A075B6K2 115 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 TTLL8A6PVC2 850 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 CCDC188H7C350 402 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 FOXS1O43638 330 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 DPM1O60762 260 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 CCNDBP1O95273 360 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 EZRP15311 586 aaKnown RBP13.95□□□□□ -0.18
FANCA-220ENST00000566409 FDXRP22570 491 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 EMP3P54852 163 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 TBPL1P62380 186 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 ABATP80404 500 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 KLC1Q07866 573 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 HIF1AQ16665 826 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 MUM1Q2TAK8 710 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 PRR30Q53SZ7 412 aaPredicted RBP13.95□□□□□ -0.18
FANCA-220ENST00000566409 VWA2Q5GFL6 755 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 VWA5B1Q5TIE3 1220 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 HECTD2Q5U5R9 776 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 SLC6A19Q695T7 634 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 UGT3A1Q6NUS8 523 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 PRMT9Q6P2P2 845 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 LAPTM4BQ86VI4 370 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 SHISA5Q8N114 240 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 AMER3Q8N944 861 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 CLEC1AQ8NC01 280 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 STT3BQ8TCJ2 826 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 MCOLN3Q8TDD5 553 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 COL26A1Q96A83 441 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 LRRC39Q96DD0 335 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 LINGO1Q96FE5 620 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 SNF8Q96H20 258 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 CABS1Q96KC9 395 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 CCDC138Q96M89 665 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 RUNDC3BQ96NL0 473 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 KRT12Q99456 494 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 ATG10Q9H0Y0 220 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 PARVBQ9HBI1 364 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 ATP13A2Q9NQ11 1180 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 PPANQ9NQ55 473 aaKnown RBP13.95□□□□□ -0.18
FANCA-220ENST00000566409 C5AR2Q9P296 337 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 SNX24Q9Y343 169 aa13.95□□□□□ -0.18
FANCA-220ENST00000566409 MRPS2Q9Y399 296 aaKnown RBP13.95□□□□□ -0.18
FANCA-220ENST00000566409 NBPF19A0A087WUL8 3843 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 E7ESA3 106 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 FFAR3O14843 346 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 GPR42O15529 346 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 STATHP02808 62 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 C8GP07360 202 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 ZGLP1P0C6A0 271 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 SLC26A3P40879 764 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 RGS4P49798 205 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 ARL4CP56559 192 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 Q0VFX4 171 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 CBLBQ13191 982 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 FRG1Q14331 258 aaKnown RBP13.94□□□□□ -0.18
FANCA-220ENST00000566409 PLEKHN1Q494U1 663 aaPredicted RBP13.94□□□□□ -0.18
FANCA-220ENST00000566409 THEMIS2Q5TEJ8 643 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 LRRC8EQ6NSJ5 796 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 AGTRAPQ6RW13 159 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 TMEM207Q6UWW9 146 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 IGFL3Q6UXB1 125 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 VN1R4Q7Z5H5 301 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 ADCK2Q7Z695 626 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 PRSS58Q8IYP2 241 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 C17orf53Q8N3J3 647 aaPredicted RBP13.94□□□□□ -0.18
FANCA-220ENST00000566409 OR11G2Q8NGC1 345 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 CPT1CQ8TCG5 803 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 CCDC177Q9NQR7 707 aaPredicted RBP13.94□□□□□ -0.18
FANCA-220ENST00000566409 MOCS1Q9NZB8 636 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 ZNF282Q9UDV7 671 aaPredicted RBP13.94□□□□□ -0.18
FANCA-220ENST00000566409 NXT1Q9UKK6 140 aaKnown RBP13.94□□□□□ -0.18
FANCA-220ENST00000566409 VWA7Q9Y334 891 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 MAP4K5Q9Y4K4 846 aa13.94□□□□□ -0.18
FANCA-220ENST00000566409 CYSRT1A8MQ03 144 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 EFCAB8A8MWE9 144 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 SLC16A5O15375 505 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 IGHEP01854 428 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 NPPBP16860 134 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 FBLP22087 321 aaKnown RBP13.93□□□□□ -0.18
FANCA-220ENST00000566409 PAFAH1B1P43034 410 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 UQCRFS1P47985 274 aa13.93□□□□□ -0.18
FANCA-220ENST00000566409 EFNA3P52797 238 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms