RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 SERPINB8P50452 374 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 ERV3-1Q14264 604 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 PTCHD3Q3KNS1 767 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 LINC00303Q3SY05 128 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 YOD1Q5VVQ6 348 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 PRAMEF13Q5VWM6 474 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 ZNF385CQ66K41 422 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 LCN10Q6JVE6 187 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 FBXO42Q6P3S6 717 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 TBC1D1Q86TI0 1168 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 OR56A3Q8NH54 315 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 ATL1Q8WXF7 558 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 ISL2Q96A47 359 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 KIAA1191Q96A73 305 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 PTERQ96BW5 349 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 MED8Q96G25 268 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 ZNF285Q96NJ3 590 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 ZFYVE21Q9BQ24 234 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 C17orf62Q9BQA9 187 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 PLCD4Q9BRC7 762 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 SGPP1Q9BX95 441 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 NLNQ9BYT8 704 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 PCBD2Q9H0N5 130 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 ACTL8Q9H568 366 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 IGSF5Q9NSI5 407 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 SNX7Q9UNH6 387 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 ACOT9Q9Y305 439 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 SCN3AQ9NY46 2000 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 A0A087X1B8 175 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 A0A096LPK6 155 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 KRT38O76015 456 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 CAPN1P07384 714 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 ANXA5P08758 320 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 LTA4HP09960 611 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 ALAS2P22557 587 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 HRH2P25021 359 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 CNTFP26441 200 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 TYK2P29597 1187 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 MAGEA12P43365 314 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 GCGRP47871 477 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 VSX2P58304 361 aaPredicted RBP13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 DCDP81605 110 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 IRF9Q00978 393 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 RELAQ04206 551 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 GRM7Q14831 915 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 OR4D1Q15615 310 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 ERCC6LQ2NKX8 1250 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 FAM214AQ32MH5 1076 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 WASHC2DQ5SRD0 308 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 FRMPD2BQ6IN97 320 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 ZNF425Q6IV72 752 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 CAPN13Q6MZZ7 669 aaPredicted RBP13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 WDR93Q6P2C0 686 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 BORAQ6PGQ7 559 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 ADGRD1Q6QNK2 874 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 LCTLQ6UWM7 567 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 FRA10AC1Q70Z53 315 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 RNF44Q7L0R7 432 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 TAOK1Q7L7X3 1001 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 CCDC91Q7Z6B0 441 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 SYVN1Q86TM6 617 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 PAQR7Q86WK9 346 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 CENPLQ8N0S6 344 aaPredicted RBP13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 TTC29Q8NA56 475 aaPredicted RBP13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 KCTD4Q8WVF5 259 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 ALKBH8Q96BT7 664 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 PYCR2Q96C36 320 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 NXNL1Q96CM4 212 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 GBP5Q96PP8 586 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 RUFY1Q96T51 708 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 NMRAL1Q9HBL8 299 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 TMEM184CQ9NVA4 438 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 CUEDC1Q9NWM3 386 aaPredicted RBP13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 DHCR7Q9UBM7 475 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 TLK1Q9UKI8 766 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 SH2B3Q9UQQ2 575 aa13.23□□□□□ -0.29
HERPUD1-210ENST00000565966 FITM1A5D6W6 292 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 TRIM49D1C9J1S8 452 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 C9J4A7 227 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 CD63P08962 238 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 NPPBP16860 134 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 TFEBP19484 476 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 CCR10P46092 362 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 KCNC1P48547 511 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 RPS18P62269 152 aaKnown RBP13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 LY6DQ14210 128 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 TGFBIQ15582 683 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 DEFB109BQ30KR1 87 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 C1orf189Q5VU69 101 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 FAM198BQ6UWH4 519 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 TTLL10Q6ZVT0 673 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 ISCA2Q86U28 154 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 GPSM1Q86YR5 675 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 ENDOVQ8N8Q3 282 aaKnown RBP13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 UBLCP1Q8WVY7 318 aaPredicted RBP13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 OR4K3Q96R72 315 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 EGFL8Q99944 293 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 VPS11Q9H270 941 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 ALG9Q9H6U8 611 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 STARD5Q9NSY2 213 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms