RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TIAL1Q01085 375 aaKnown RBP eCLIP13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 TAP2Q03519 686 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 SSPNQ14714 243 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 ARHGAP19Q14CB8 494 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 FAM214AQ32MH5 1076 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 HECTD2Q5U5R9 776 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 MRPL14Q6P1L8 145 aaKnown RBP13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 FBXO42Q6P3S6 717 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 C3orf62Q6ZUJ4 267 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 SLC26A11Q86WA9 606 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 PAQR7Q86WK9 346 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 RELL1Q8IUW5 271 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 FDCSPQ8NFU4 85 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 OR2Y1Q8NGV0 311 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 PTERQ96BW5 349 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 PLCD4Q9BRC7 762 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 MFRPQ9BY79 579 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 ATG10Q9H0Y0 220 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 SYNPO2LQ9H987 977 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 LRRC4CQ9HCJ2 640 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 LUZP4Q9P127 313 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 ZFATQ9P243 1243 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 CTSFQ9UBX1 484 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 MTRF1LQ9UGC7 380 aaKnown RBP13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 G3BP2Q9UN86 482 aaKnown RBP13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 PDE10AQ9Y233 779 aa13.02□□□□□ -0.33
VPS9D1-204ENST00000565023 IGKV1-8A0A0C4DH67 115 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 TCRBV9S1A1TA0A576 114 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 H7BY64 318 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 GFYI3L273 518 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 HAT1O14929 419 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 PIAS1O75925 651 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 UMODP07911 640 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 PIM1P11309 404 aaPredicted RBP13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 HSD17B2P37059 387 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 GCGRP47871 477 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 MLLT10P55197 1068 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 TBPL1P62380 186 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 PRDX1Q06830 199 aaKnown RBP13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 NAA25Q14CX7 972 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 HKDC1Q2TB90 917 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 NADK2Q4G0N4 442 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 PRAMEF13Q5VWM6 474 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 CEP128Q6ZU80 1094 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 MED25Q71SY5 747 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 COX15Q7KZN9 410 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 OVCH1Q7RTY7 1134 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 PPP1R32Q7Z5V6 425 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 CSNK1A1LQ8N752 337 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 TMEM102Q8N9M5 508 aaPredicted RBP13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 FBXO15Q8NCQ5 510 aaPredicted RBP13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 MCOLN3Q8TDD5 553 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 IFT81Q8WYA0 676 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 ZNF285Q96NJ3 590 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 PRAP1Q96NZ9 151 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 FMO2Q99518 471 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 OLFM1Q99784 485 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 NUDT9Q9BW91 350 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 TSPYL1Q9H0U9 437 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 CLMPQ9H6B4 373 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 ZNF304Q9HCX3 659 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 CCDC177Q9NQR7 707 aaPredicted RBP13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 SMYD2Q9NRG4 433 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 P4HTMQ9NXG6 502 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 NSMCE4AQ9NXX6 385 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 CORO1CQ9ULV4 474 aaPredicted RBP13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 PSAT1Q9Y617 370 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 BSNQ9UPA5 3926 aa13.01□□□□□ -0.33
VPS9D1-204ENST00000565023 PABPN1LA6NDY0 278 aaKnown RBP13□□□□□ -0.33
VPS9D1-204ENST00000565023 FAM159BA6NKW6 160 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 GUCA1CO95843 209 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 C8GP07360 202 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 CD63P08962 238 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 RHOXF2BP0C7M4 288 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 FBLP22087 321 aaKnown RBP13□□□□□ -0.33
VPS9D1-204ENST00000565023 SKIV2L2P42285 1042 aaKnown RBP13□□□□□ -0.33
VPS9D1-204ENST00000565023 CSRP3P50461 194 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 NAE1Q13564 534 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 NKG7Q16617 165 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 PHKG1Q16816 387 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 MUM1Q2TAK8 710 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 YOD1Q5VVQ6 348 aaPredicted RBP13□□□□□ -0.33
VPS9D1-204ENST00000565023 LRRC8EQ6NSJ5 796 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 FAM45BPQ6NSW5 357 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 AGTRAPQ6RW13 159 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 STRA8Q7Z7C7 330 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 IFT20Q8IY31 132 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 LRRC56Q8IYG6 542 aaPredicted RBP13□□□□□ -0.33
VPS9D1-204ENST00000565023 CLEC1AQ8NC01 280 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 FAM45AQ8TCE6 357 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 CDKL2Q92772 493 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 RERGQ96A58 199 aaPredicted RBP13□□□□□ -0.33
VPS9D1-204ENST00000565023 C10orf90Q96M02 699 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 FER1L6-AS2Q96M78 137 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 RHOXF2Q9BQY4 288 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 MCMBPQ9BTE3 642 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 UTP6Q9NYH9 597 aaKnown RBP13□□□□□ -0.33
VPS9D1-204ENST00000565023 GPR83Q9NYM4 423 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 ANKMY1Q9P2S6 941 aa13□□□□□ -0.33
VPS9D1-204ENST00000565023 SH2B3Q9UQQ2 575 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms