RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 ACTR5Q9H9F9 607 aaPredicted RBP21.13■□□□□ 0.97
LINC01960-201ENST00000563759 C1orf109Q9NX04 203 aa21.13■□□□□ 0.97
LINC01960-201ENST00000563759 H7BY64 318 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 BTN3A3O00478 584 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 HNRNPCL1O60812 293 aaKnown RBP21.12■□□□□ 0.97
LINC01960-201ENST00000563759 SEC22BO75396 215 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 AVPR2P30518 371 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 CPA2P48052 419 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 RASSF2P50749 326 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 DIO3P55073 304 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 MAZP56270 477 aaKnown RBP21.12■□□□□ 0.97
LINC01960-201ENST00000563759 NCALDP61601 193 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 ABATP80404 500 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 MAD2L1Q13257 205 aaPredicted RBP21.12■□□□□ 0.97
LINC01960-201ENST00000563759 BIRC2Q13490 618 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 NAA25Q14CX7 972 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 ZNF528Q3MIS6 628 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 TMIGD1Q6UXZ0 262 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 SYT12Q8IV01 421 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 LAS2Q8IYD9 372 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 ADGRF3Q8IZF5 1079 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 MIER2Q8N344 545 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 OR2L3Q8NG85 312 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 NELL1Q92832 810 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 PRAP1Q96NZ9 151 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 AIG1Q9NVV5 245 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 UCKL1Q9NWZ5 548 aa21.12■□□□□ 0.97
LINC01960-201ENST00000563759 NOP53Q9NZM5 478 aaKnown RBP21.12■□□□□ 0.97
LINC01960-201ENST00000563759 POLR3HQ9Y535 204 aaPredicted RBP21.12■□□□□ 0.97
LINC01960-201ENST00000563759 SERTM1A2A2V5 107 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 GSAPA4D1B5 854 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 MAGEB17A8MXT2 336 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 PSMD12O00232 456 aaPredicted RBP21.11■□□□□ 0.97
LINC01960-201ENST00000563759 PRICKLE3O43900 615 aaPredicted RBP21.11■□□□□ 0.97
LINC01960-201ENST00000563759 HSD3B1P14060 373 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 EZRP15311 586 aaKnown RBP21.11■□□□□ 0.97
LINC01960-201ENST00000563759 HSD3B2P26439 372 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 CMPK1P30085 196 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 NME5P56597 212 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 PHEXP78562 749 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 EMX2Q04743 252 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 KIR2DS3Q14952 304 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 RFTN2Q52LD8 501 aaPredicted RBP21.11■□□□□ 0.97
LINC01960-201ENST00000563759 TMEM26Q6ZUK4 368 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 ZNF740Q8NDX6 193 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 ELF4Q99607 663 aaPredicted RBP21.11■□□□□ 0.97
LINC01960-201ENST00000563759 BRF2Q9HAW0 419 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 CCDC167Q9P0B6 97 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 VPS13AQ96RL7 3174 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 LOC100653049A0A140TA62 436 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 FAM221BA6H8Z2 402 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 OR6C74A6NCV1 312 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 KRT34O76011 436 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 IRX1P78414 480 aaPredicted RBP21.11■□□□□ 0.97
LINC01960-201ENST00000563759 REEP5Q00765 189 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 RBBP5Q15291 538 aaKnown RBP21.11■□□□□ 0.97
LINC01960-201ENST00000563759 ANGPT1Q15389 498 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 ZFAND4Q86XD8 727 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 ZNF761Q86XN6 746 aaPredicted RBP21.11■□□□□ 0.97
LINC01960-201ENST00000563759 FAM20CQ8IXL6 584 aa21.11■□□□□ 0.97
LINC01960-201ENST00000563759 SDR39U1Q9NRG7 319 aaPredicted RBP21.11■□□□□ 0.97
LINC01960-201ENST00000563759 WDFY4Q6ZS81 3184 aa21.1■□□□□ 0.97
LINC01960-201ENST00000563759 CFIP05156 583 aa21.1■□□□□ 0.97
LINC01960-201ENST00000563759 SP9P0CG40 484 aa21.1■□□□□ 0.97
LINC01960-201ENST00000563759 COX4I1P13073 169 aa21.1■□□□□ 0.97
LINC01960-201ENST00000563759 PRDX6P30041 224 aa21.1■□□□□ 0.97
LINC01960-201ENST00000563759 SIM2Q14190 667 aaPredicted RBP21.1■□□□□ 0.97
LINC01960-201ENST00000563759 SMU1Q2TAY7 513 aa21.1■□□□□ 0.97
LINC01960-201ENST00000563759 AGKQ53H12 422 aa21.1■□□□□ 0.97
LINC01960-201ENST00000563759 PRR23BQ6ZRT6 265 aa21.1■□□□□ 0.97
LINC01960-201ENST00000563759 CMTM7Q96FZ5 175 aa21.1■□□□□ 0.97
LINC01960-201ENST00000563759 SLC6A20Q9NP91 592 aa21.1■□□□□ 0.97
LINC01960-201ENST00000563759 VPS29Q9UBQ0 182 aa21.1■□□□□ 0.97
LINC01960-201ENST00000563759 EIF3LQ9Y262 564 aaKnown RBP21.1■□□□□ 0.97
LINC01960-201ENST00000563759 IGKV1-8A0A0C4DH67 115 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 POLR2CP19387 275 aaPredicted RBP21.09■□□□□ 0.97
LINC01960-201ENST00000563759 PRPH2P23942 346 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 GRK3P35626 688 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 FASLGP48023 281 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 BNC1Q01954 994 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 IL23RQ5VWK5 629 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 PAOXQ6QHF9 649 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 SNX32Q86XE0 403 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 ARL14Q8N4G2 192 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 OR9I1Q8NGQ6 314 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 KLHL29Q96CT2 875 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 DPH7Q9BTV6 452 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 BRINP2Q9C0B6 783 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 PITHD1Q9GZP4 211 aaPredicted RBP21.09■□□□□ 0.97
LINC01960-201ENST00000563759 DMRT3Q9NQL9 472 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.09■□□□□ 0.97
LINC01960-201ENST00000563759 GPR45Q9Y5Y3 372 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 FEZF1A0PJY2 475 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 NOBOXO60393 691 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 THRAP10827 490 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 MNAT1P51948 309 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 RPS13P62277 151 aaKnown RBP21.09■□□□□ 0.97
LINC01960-201ENST00000563759 CSNK1G2P78368 415 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 MXRA7P84157 204 aa21.09■□□□□ 0.97
LINC01960-201ENST00000563759 CYLC2Q14093 348 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms