RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 A0A0A6YYC8 382 aaPredicted RBP9.78□□□□□ -0.84
SF3B3-204ENST00000563739 I3L1I5 382 aaPredicted RBP9.78□□□□□ -0.84
SF3B3-204ENST00000563739 PJA2O43164 708 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 C1orf105O95561 183 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 SLC1A1P43005 524 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 EMP3P54852 163 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 DLX5P56178 289 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 ALDH6A1Q02252 535 aaKnown RBP9.78□□□□□ -0.84
SF3B3-204ENST00000563739 ACVR1Q04771 509 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 GBX1Q14549 363 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 OR1C1Q15619 314 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 SF1Q15637 639 aaKnown RBP9.78□□□□□ -0.84
SF3B3-204ENST00000563739 MUM1Q2TAK8 710 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 CCDC38Q502W7 563 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 KRTCAP3Q53RY4 240 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.78□□□□□ -0.84
SF3B3-204ENST00000563739 ABHD17BQ5VST6 288 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 PLAG1Q6DJT9 500 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 ITPRIPL1Q6GPH6 555 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 SPINK14Q6IE38 97 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 AADACL2Q6P093 401 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 GALNTL5Q7Z4T8 443 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 KRTAP1-3Q8IUG1 177 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 TMTC1Q8IUR5 882 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 CCDC50Q8IVM0 306 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 CPSF7Q8N684 471 aaKnown RBP9.78□□□□□ -0.84
SF3B3-204ENST00000563739 STYXQ8WUJ0 223 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 SLC22A18Q96BI1 424 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 VPS50Q96JG6 964 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 SMR3AQ99954 134 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 ZFYVE21Q9BQ24 234 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 TRIM5Q9C035 493 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 GPAMQ9HCL2 828 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 CCM2LQ9NUG4 571 aaPredicted RBP9.78□□□□□ -0.84
SF3B3-204ENST00000563739 STMN3Q9NZ72 180 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.78□□□□□ -0.84
SF3B3-204ENST00000563739 MARCH4Q9P2E8 410 aaPredicted RBP9.78□□□□□ -0.84
SF3B3-204ENST00000563739 TFR2Q9UP52 801 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 RNF6Q9Y252 685 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 FAM169AQ9Y6X4 670 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 STAB1Q9NY15 2570 aa9.78□□□□□ -0.84
SF3B3-204ENST00000563739 CSPG4Q6UVK1 2322 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 RCCD1A6NED2 376 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 TMEM200CA6NKL6 621 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 H7C0C1 242 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 FANCGO15287 622 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 FKBP9O95302 570 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 GOT2P00505 430 aaKnown RBP9.77□□□□□ -0.85
SF3B3-204ENST00000563739 EIF2S1P05198 315 aaKnown RBP9.77□□□□□ -0.85
SF3B3-204ENST00000563739 HEXBP07686 556 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 TNNT3P45378 269 aaPredicted RBP9.77□□□□□ -0.85
SF3B3-204ENST00000563739 ATP5OP48047 213 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 ZNF75DP51815 510 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 HADHBP55084 474 aaKnown RBP9.77□□□□□ -0.85
SF3B3-204ENST00000563739 GDF10P55107 478 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 CASP6P55212 293 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 HSPA14Q0VDF9 509 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 ZNF449Q6P9G9 518 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 VN1R4Q7Z5H5 301 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.77□□□□□ -0.85
SF3B3-204ENST00000563739 ANKRD37Q7Z713 158 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 LDB1Q86U70 411 aaPredicted RBP9.77□□□□□ -0.85
SF3B3-204ENST00000563739 CD163Q86VB7 1156 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 PRIMA1Q86XR5 153 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 RHOT2Q8IXI1 618 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 GHDCQ8N2G8 530 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 DNAAF3Q8N9W5 541 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 CFAP61Q8NHU2 1237 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 MVB12AQ96EY5 273 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 MRFAP1L1Q96HT8 127 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 CCDC138Q96M89 665 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 MDFIQ99750 246 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 PLCD4Q9BRC7 762 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 DPH7Q9BTV6 452 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 P2RY12Q9H244 342 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 MKKSQ9NPJ1 570 aaPredicted RBP9.77□□□□□ -0.85
SF3B3-204ENST00000563739 PLSCR2Q9NRY7 297 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 INTS7Q9NVH2 962 aaKnown RBP9.77□□□□□ -0.85
SF3B3-204ENST00000563739 MKL2Q9ULH7 1088 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 PPT2Q9UMR5 302 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 AAR2Q9Y312 384 aaKnown RBP9.77□□□□□ -0.85
SF3B3-204ENST00000563739 ALG6Q9Y672 507 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 COL6A5A8TX70 2615 aa9.77□□□□□ -0.85
SF3B3-204ENST00000563739 EML6Q6ZMW3 1958 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 CUBNO60494 3623 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 FAM90A27PA6NNH2 459 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 GABRR3A8MPY1 467 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 QSOX1O00391 747 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 TTI1O43156 1089 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 SPOPO43791 374 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 NME2P1O60361 137 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 MFAP3LO75121 409 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 FAM155BO75949 473 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 STATHP02808 62 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 SP1P08047 785 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 HOXD4P09016 255 aaPredicted RBP9.76□□□□□ -0.85
SF3B3-204ENST00000563739 TPM1P09493 284 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 OR56A5P0C7T3 313 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 C8orf89P0DMQ9 161 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 RBP3P10745 1247 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms