RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 TSTA3Q13630 321 aaPredicted RBP15.23■□□□□ 0.03
LMX1B-204ENST00000561065 WHAMMP3Q1A5X7 153 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 RBM20Q5T481 1227 aaKnown RBP15.23■□□□□ 0.03
LMX1B-204ENST00000561065 TEDDM1Q5T9Z0 273 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 VWA5B1Q5TIE3 1220 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 ICE2Q659A1 982 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 JMJD6Q6NYC1 403 aaPredicted RBP15.23■□□□□ 0.03
LMX1B-204ENST00000561065 FBXO42Q6P3S6 717 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 MYO1HQ8N1T3 1032 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 ARHGEF39Q8N4T4 335 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 FBXO36Q8NEA4 188 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 CPT1CQ8TCG5 803 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 VPS39Q96JC1 886 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 PWWP2AQ96N64 755 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 IP6K3Q96PC2 410 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 PLCD4Q9BRC7 762 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 ZNF552Q9H707 407 aaPredicted RBP15.23■□□□□ 0.03
LMX1B-204ENST00000561065 WDR54Q9H977 334 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 MRPS30Q9NP92 439 aaKnown RBP15.23■□□□□ 0.03
LMX1B-204ENST00000561065 CUEDC1Q9NWM3 386 aaPredicted RBP15.23■□□□□ 0.03
LMX1B-204ENST00000561065 VWA7Q9Y334 891 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 HS3ST3B1Q9Y662 390 aa15.23■□□□□ 0.03
LMX1B-204ENST00000561065 HYKKA2RU49 373 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 VSTM2BA6NLU5 285 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 TTLL8A6PVC2 850 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 E7ESA3 106 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 H0YGG7 62 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 AGPSO00116 658 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 SLC16A5O15375 505 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 DPM1O60762 260 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 AHSGP02765 367 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 ALBP02768 609 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 EIF2S1P05198 315 aaKnown RBP15.22■□□□□ 0.03
LMX1B-204ENST00000561065 C8GP07360 202 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 PIM1P11309 404 aaPredicted RBP15.22■□□□□ 0.03
LMX1B-204ENST00000561065 MMP11P24347 488 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 RPA3P35244 121 aaPredicted RBP15.22■□□□□ 0.03
LMX1B-204ENST00000561065 IL2P60568 153 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 ARF3P61204 181 aaPredicted RBP15.22■□□□□ 0.03
LMX1B-204ENST00000561065 PDAP1Q13442 181 aaKnown RBP15.22■□□□□ 0.03
LMX1B-204ENST00000561065 MYBPC3Q14896 1274 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 HKDC1Q2TB90 917 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 FAM214AQ32MH5 1076 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 STEAP4Q687X5 459 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 FAM45BPQ6NSW5 357 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 SLC26A11Q86WA9 606 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 ZBED8Q8IZ13 594 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 GALNT16Q8N428 558 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 FAM45AQ8TCE6 357 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 FER1L6-AS2Q96M78 137 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 C16orf45Q96MC5 204 aaPredicted RBP15.22■□□□□ 0.03
LMX1B-204ENST00000561065 PHACTR1Q9C0D0 580 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 PCBD2Q9H0N5 130 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 TSPYL1Q9H0U9 437 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 ZBTB20Q9HC78 741 aaPredicted RBP15.22■□□□□ 0.03
LMX1B-204ENST00000561065 ANKMY1Q9P2S6 941 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 FBXL4Q9UKA2 621 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 ADAMTS6Q9UKP5 1117 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 RUVBL1Q9Y265 456 aaKnown RBP15.22■□□□□ 0.03
LMX1B-204ENST00000561065 MAP4K5Q9Y4K4 846 aa15.22■□□□□ 0.03
LMX1B-204ENST00000561065 PEX12O00623 359 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 P2RX6O15547 441 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 RAD51CO43502 376 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 SYF2O95926 243 aaKnown RBP15.21■□□□□ 0.03
LMX1B-204ENST00000561065 HRH2P25021 359 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 PGGT1BP53609 377 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 SLC12A2P55011 1212 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 PLTPP55058 493 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 CDKN2DP55273 166 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 ABATP80404 500 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 PRDX1Q06830 199 aaKnown RBP15.21■□□□□ 0.03
LMX1B-204ENST00000561065 HP1BP3Q5SSJ5 553 aaPredicted RBP15.21■□□□□ 0.03
LMX1B-204ENST00000561065 DUPD1Q68J44 220 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 KIRREL2Q6UWL6 708 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 MBOAT1Q6ZNC8 495 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 UBE2R2Q712K3 238 aaPredicted RBP15.21■□□□□ 0.03
LMX1B-204ENST00000561065 CYS1Q717R9 158 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 ZNF572Q7Z3I7 529 aaPredicted RBP15.21■□□□□ 0.03
LMX1B-204ENST00000561065 ANKMY2Q8IV38 441 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 C17orf53Q8N3J3 647 aaPredicted RBP15.21■□□□□ 0.03
LMX1B-204ENST00000561065 CLEC1AQ8NC01 280 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 ZNF592Q92610 1267 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 CCDC138Q96M89 665 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 OR2A5Q96R48 311 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 DPH5Q9H2P9 285 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 ABCF3Q9NUQ8 709 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 SH2B3Q9UQQ2 575 aa15.21■□□□□ 0.03
LMX1B-204ENST00000561065 USP9YO00507 2555 aaPredicted RBP15.2■□□□□ 0.02
LMX1B-204ENST00000561065 FFAR3O14843 346 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 HAT1O14929 419 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 TP73O15350 636 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 GPR42O15529 346 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 GNLYP22749 145 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 CCND1P24385 295 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 EFNA3P52797 238 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 SOX8P57073 446 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 TBPL1P62380 186 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 C2orf54Q08AI8 447 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 SP140Q13342 867 aa15.2■□□□□ 0.02
LMX1B-204ENST00000561065 UBAP2LQ14157 1087 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms