RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 KLHDC7BQ96G42 594 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 APIPQ96GX9 242 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 MTERF1Q99551 399 aaKnown RBP16.5■□□□□ 0.23
HDDC3-206ENST00000561036 AIF1LQ9BQI0 150 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 GSDMCQ9BYG8 508 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 TPSD1Q9BZJ3 242 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 RHBGQ9H310 441 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 CLMPQ9H6B4 373 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 DMRT3Q9NQL9 472 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 PRDM6Q9NQX0 595 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 TAC3Q9UHF0 121 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 OR52A4PA6NMU1 304 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 MAGEB17A8MXT2 336 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 TRIM38O00635 465 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 ENTPD5O75356 428 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 PDE5AO76074 875 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 CCNDBP1O95273 360 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 THEGLP0DJG4 465 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 F3P13726 295 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 SHMT2P34897 504 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 BLKP51451 505 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 ABATP80404 500 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 PRDX1Q06830 199 aaKnown RBP16.49■□□□□ 0.23
HDDC3-206ENST00000561036 ACSM2AQ08AH3 577 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 EIF2B5Q13144 721 aaKnown RBP16.49■□□□□ 0.23
HDDC3-206ENST00000561036 DDX39BQ13838 428 aaKnown RBP16.49■□□□□ 0.23
HDDC3-206ENST00000561036 SAMD4BQ5PRF9 694 aaKnown RBP16.49■□□□□ 0.23
HDDC3-206ENST00000561036 ICE2Q659A1 982 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 ACSM2BQ68CK6 577 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 SLC36A4Q6YBV0 504 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 MAMSTRQ6ZN01 415 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 IQCHQ86VS3 1027 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 HPS6Q86YV9 775 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 ENDOVQ8N8Q3 282 aaKnown RBP16.49■□□□□ 0.23
HDDC3-206ENST00000561036 LMNTD1Q8N9Z9 388 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 MFSD2AQ8NA29 543 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 DNAJB8Q8NHS0 232 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 RLN3Q8WXF3 142 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 STARD8Q92502 1023 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 JADE3Q92613 823 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 STMN2Q93045 179 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 LRRC58Q96CX6 371 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 C11orf24Q96F05 449 aaPredicted RBP16.49■□□□□ 0.23
HDDC3-206ENST00000561036 APOLD1Q96LR9 279 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 RNPEPL1Q9HAU8 725 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 OR6C2Q9NZP2 312 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 SCHIP1Q9P0W5 487 aaPredicted RBP16.49■□□□□ 0.23
HDDC3-206ENST00000561036 TMEM181Q9P2C4 612 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 THEGQ9P2T0 379 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 PNMA8BQ9ULN7 279 aaPredicted RBP16.49■□□□□ 0.23
HDDC3-206ENST00000561036 ICKQ9UPZ9 632 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 POMPQ9Y244 141 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 DLGAP4Q9Y2H0 992 aa16.49■□□□□ 0.23
HDDC3-206ENST00000561036 C15orf38-AP3S2A0A0A6YYH1 394 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 ASPDHA6ND91 283 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 OR5K4A6NMS3 321 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 STK25O00506 426 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 PRICKLE3O43900 615 aaPredicted RBP16.48■□□□□ 0.23
HDDC3-206ENST00000561036 SDC1P18827 310 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 PRPS1L1P21108 318 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 HRH2P25021 359 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 PTX3P26022 381 aaPredicted RBP16.48■□□□□ 0.23
HDDC3-206ENST00000561036 AK4P27144 223 aaPredicted RBP16.48■□□□□ 0.23
HDDC3-206ENST00000561036 DPP6P42658 865 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 ASMTP46597 345 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 RPS13P62277 151 aaKnown RBP16.48■□□□□ 0.23
HDDC3-206ENST00000561036 REEP5Q00765 189 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 CEACAM7Q14002 265 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 FZD2Q14332 565 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 PTGR1Q14914 329 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 TIGD2Q4W5G0 525 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 GALNT18Q6P9A2 607 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 SLC30A9Q6PML9 568 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 MSANTD1Q6ZTZ1 278 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 ARPINQ7Z6K5 226 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 PACS2Q86VP3 889 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 NRROSQ86YC3 692 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 C2orf73Q8N5S3 287 aaPredicted RBP16.48■□□□□ 0.23
HDDC3-206ENST00000561036 FAM160A2Q8N612 972 aaPredicted RBP16.48■□□□□ 0.23
HDDC3-206ENST00000561036 SNX19Q92543 992 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 VPS33AQ96AX1 596 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 TESCQ96BS2 214 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 CXorf40BQ96DE9 158 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 SPACA7Q96KW9 195 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 ADA2Q9NZK5 511 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 ABCD2Q9UBJ2 740 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 SUCOQ9UBS9 1254 aaKnown RBP16.48■□□□□ 0.23
HDDC3-206ENST00000561036 SIT1Q9Y3P8 196 aa16.48■□□□□ 0.23
HDDC3-206ENST00000561036 LRP4O75096 1905 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 C9JVG2 144 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 FXYD1O00168 92 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 FKBP6O75344 327 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 GSTM2P28161 218 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 CXCL12P48061 93 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 MTAPQ13126 283 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 NFYCQ13952 458 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 DPY19L1Q2PZI1 675 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 AAGABQ6PD74 315 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 LAYNQ6UX15 382 aa16.47■□□□□ 0.23
HDDC3-206ENST00000561036 PARGQ86W56 976 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms