RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 TBX5Q99593 518 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 GPR22Q99680 433 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 PPM1HQ9ULR3 514 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 TMEM131LA2VDJ0 1609 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZSCAN5BA6NJL1 495 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF670-ZNF695F2Z2N8 137 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 GMFGO60234 142 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 COQ9O75208 318 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 SIX3O95343 332 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 EDNRAP25101 427 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 STOMP27105 288 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ALG10Q5BKT4 473 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 AVL9Q8NBF6 648 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 PROKR2Q8NFJ6 384 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 OR2L2Q8NH16 312 aa12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 RPL10LQ96L21 214 aaKnown RBP12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF317Q96PQ6 595 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 METTL8Q9H825 291 aaKnown RBP12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 POLMQ9NP87 494 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P11-201ENST00000560634 PRKCHP24723 683 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 PGDP52209 483 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 GFOD2Q3B7J2 385 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 OR4F3Q6IEY1 312 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 BRAT1Q6PJG6 821 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF773Q6PK81 442 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 EPGNQ6UW88 154 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 TMCO2Q7Z6W1 182 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 SLC44A3Q8N4M1 653 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 C1orf52Q8N6N3 182 aaKnown RBP12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 FBXO15Q8NCQ5 510 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 TRPM4Q8TD43 1214 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 CREB3L1Q96BA8 519 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 SLC30A2Q9BRI3 323 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 BRD7Q9NPI1 651 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 MKS1Q9NXB0 559 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 GALPQ9UBC7 116 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 H3BSA7 217 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 ITM2AO43736 263 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 ABCB7O75027 752 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 SLURP2P0DP57 97 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 FAM76BQ5HYJ3 339 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 CLEC12AQ5QGZ9 265 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 CHADLQ6NUI6 762 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 NCEH1Q6PIU2 408 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 CENPMQ9NSP4 180 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF451Q9Y4E5 1061 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 SEPT4O43236 478 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 DNAJB5O75953 348 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 CYP17A1P05093 508 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 HLA-DQB2P05538 268 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 PRKCDQ05655 676 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 ENPP2Q13822 863 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 NCBP2-AS2Q69YL0 99 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 XKRXQ6PP77 449 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 LRRC69Q6ZNQ3 347 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 NRSN1Q8IZ57 195 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZUFSPQ96AP4 578 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 DHRS1Q96LJ7 313 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZBTB26Q9HCK0 441 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 TM9SF3Q9HD45 589 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 PCDHB16Q9NRJ7 776 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 CLCA3PQ9Y6N3 262 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 WASHC1A8K0Z3 465 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 WASH3PC4AMC7 463 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 PSMD9O00233 223 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 CREG1O75629 220 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 TGFB1P01137 390 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 BMP8BP34820 402 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 CDH11P55287 796 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 ARF3P61204 181 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 ARF1P84077 181 aaKnown RBP12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 KCNJ11Q14654 390 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 SEC23BQ15437 767 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 TSTQ16762 297 aaKnown RBP12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 WASH2PQ6VEQ5 465 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 BMP8AQ7Z5Y6 402 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 SLC37A3Q8NCC5 494 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 OR56A1Q8NGH5 318 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 SEC14L1Q92503 715 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 NUS1Q96E22 293 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 PKP2Q99959 881 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 TOR3AQ9H497 397 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 ABCB8Q9NUT2 735 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 NID2Q14112 1375 aa12.86□□□□□ -0.35
CSPG4P11-201ENST00000560634 TEX13CA0A0J9YWL9 993 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 PRSS51A0A1B0GVH4 220 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 FAM170BA6NMN3 283 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 I3L521 148 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 DLGAP1O14490 977 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 CSTBP04080 98 aaKnown RBP12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 C8AP07357 584 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 EBLN1P0CF75 366 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 ACTR1BP42025 376 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 ACTR1AP61163 376 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 EMX2Q04743 252 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 GDPD4Q6W3E5 623 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZNF101Q8IZC7 436 aa12.85□□□□□ -0.35
CSPG4P11-201ENST00000560634 ZFAND2BQ8WV99 257 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms