RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 SNX20Q7Z614 316 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 B3GNT8Q7Z7M8 397 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 ZAR1Q86SH2 424 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 SYVN1Q86TM6 617 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 TSPYL5Q86VY4 417 aaPredicted RBP5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 KRT73Q86Y46 540 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 SNX29P2Q8IUI4 249 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 MFSD6LQ8IWD5 586 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 C1orf52Q8N6N3 182 aaKnown RBP5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 LRRC52Q8N7C0 313 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 FAM181AQ8N9Y4 354 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 FAM83FQ8NEG4 500 aaPredicted RBP5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 ZNF548Q8NEK5 533 aaPredicted RBP5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 OR10T2Q8NGX3 314 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 SLC7A6Q92536 515 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 PEX13Q92968 403 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 UBE2FQ969M7 185 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 KIAA1143Q96AT1 154 aaPredicted RBP5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 TUBGCP3Q96CW5 907 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 MOCOSQ96EN8 888 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 PGAP3Q96FM1 320 aaPredicted RBP5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 TMEM169Q96HH4 297 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 C12orf42Q96LP6 360 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 C1orf74Q96LT6 269 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 SLC2A13Q96QE2 648 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 SEPHS2Q99611 448 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 OMDQ99983 421 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 TEX13BQ9BXU2 312 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 ALOXE3Q9BYJ1 711 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 MS4A5Q9H3V2 200 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 TFB2MQ9H5Q4 396 aaKnown RBP5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 TDRD3Q9H7E2 651 aaKnown RBP5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 ACTR8Q9H981 624 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 IL1RL2Q9HB29 575 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 FBRSL1Q9HCM7 1045 aaKnown RBP5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 ASAH2Q9NR71 780 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 RNF146Q9NTX7 359 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 GIMAP4Q9NUV9 329 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 PIH1D1Q9NWS0 290 aaKnown RBP5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 ADPRHL2Q9NX46 363 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 MRPL39Q9NYK5 338 aaKnown RBP5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 EHD3Q9NZN3 535 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 PIM2Q9P1W9 311 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 ERVK-18Q9QC07 812 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 HECAQ9UBI9 543 aaPredicted RBP5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 PNMA8BQ9ULN7 279 aaPredicted RBP5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 FAM50BQ9Y247 325 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 CFL2Q9Y281 166 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 FIS1Q9Y3D6 152 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 MFHAS1Q9Y4C4 1052 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 AUP1Q9Y679 476 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 AP1M2Q9Y6Q5 423 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 MIA3Q5JRA6 1907 aa5.8□□□□□ -1.48
SNRPA1-209ENST00000560307 BRCA1P38398 1863 aaKnown RBP5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 GBF1Q92538 1859 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 ZNF638Q14966 1978 aaKnown RBP5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 ATP6AP2A0A1C7CYW4 349 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 LINC00862A6NCI5 91 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 PRR23AA6NEV1 266 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 NEMP2A6NFY4 417 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 A6NL46 340 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 SNTNA6NMZ2 147 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 POLRMTO00411 1230 aaKnown RBP5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 SCDO00767 359 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 GNGT2O14610 69 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 DSCR3O14972 297 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 TGM5O43548 720 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 HS6ST1O60243 411 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 FAM20BO75063 409 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 PDE9AO76083 593 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 SEMA3DO95025 777 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 MLYCDO95822 493 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 C1QBP02746 253 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 FTH1P02794 183 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 PGK2P07205 417 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 RPS17P08708 135 aaKnown RBP5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 CXCL8P10145 99 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 UROSP10746 265 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 SRFP11831 508 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 NCK1P16333 377 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 ERCC2P18074 760 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 SAT1P21673 171 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 CD72P21854 359 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 IL32P24001 234 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 IGFBP5P24593 272 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 CCNCP24863 283 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 ADRA1AP35348 466 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 SCNN1GP51170 649 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 ARHGDIAP52565 204 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 GTF2A2P52657 109 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 TPI1P60174 286 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 PURAQ00577 322 aaKnown RBP5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 LAMTOR4Q0VGL1 99 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 EIF2B5Q13144 721 aaKnown RBP5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 ASAH1Q13510 395 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 RAPSNQ13702 412 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 BAATQ14032 418 aaPredicted RBP5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 LRRC32Q14392 662 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 GRB7Q14451 532 aa5.79□□□□□ -1.48
SNRPA1-209ENST00000560307 SEMA3AQ14563 771 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms