RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 IGSF5Q9NSI5 407 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 GEMIN8Q9NWZ8 242 aaKnown RBP11.49□□□□□ -0.57
TPM1-216ENST00000558910 GRHL1Q9NZI5 618 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 IKZF3Q9UKT9 509 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 SH2B3Q9UQQ2 575 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 TP53TG5Q9Y2B4 290 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 VWA7Q9Y334 891 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 PCDHGA6Q9Y5G7 932 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 AP1M2Q9Y6Q5 423 aa11.49□□□□□ -0.57
TPM1-216ENST00000558910 TLN1Q9Y490 2541 aaKnown RBP11.48□□□□□ -0.57
TPM1-216ENST00000558910 FAM95CA0A1B0GW59 222 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 FEZF1A0PJY2 475 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 NPEPPSL1A6NEC2 478 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 ZNF839A8K0R7 811 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 CXorf49A8MYA2 514 aaPredicted RBP11.48□□□□□ -0.57
TPM1-216ENST00000558910 B8ZZF3 427 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 E7ENX8 843 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 H0YGG7 62 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 H3BMH7 237 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 CNOT3O75175 753 aaKnown RBP11.48□□□□□ -0.57
TPM1-216ENST00000558910 RFPL1O75677 317 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 MED26O95402 600 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 PLA2G2AP14555 144 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 FOLR3P41439 243 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 IL2P60568 153 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 ARF3P61204 181 aaPredicted RBP11.48□□□□□ -0.57
TPM1-216ENST00000558910 TBPL1P62380 186 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 MEF2AQ02078 507 aaPredicted RBP11.48□□□□□ -0.57
TPM1-216ENST00000558910 TAP2Q03519 686 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 UGT8Q16880 541 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 HKDC1Q2TB90 917 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 DUPD1Q68J44 220 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 FAM45BPQ6NSW5 357 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 C8orf74Q6P047 294 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 FBXO42Q6P3S6 717 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 KIAA0408Q6ZU52 694 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 NEK10Q6ZWH5 1172 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 CNTN4Q8IWV2 1026 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 FAM45AQ8TCE6 357 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 ZUFSPQ96AP4 578 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 LRRC39Q96DD0 335 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 LRRC1Q9BTT6 524 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 CCDC177Q9NQR7 707 aaPredicted RBP11.48□□□□□ -0.57
TPM1-216ENST00000558910 ARL15Q9NXU5 204 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 WHRNQ9P202 907 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 SRPK3Q9UPE1 567 aa11.48□□□□□ -0.57
TPM1-216ENST00000558910 MTO1Q9Y2Z2 717 aaKnown RBP11.48□□□□□ -0.57
TPM1-216ENST00000558910 NAV2Q8IVL1 2488 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 SEC16AO15027 2179 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 IGKV1-8A0A0C4DH67 115 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 A0A1B0GX78 115 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 HYKKA2RU49 373 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 SLC35F4A4IF30 521 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 NCF1BA6NI72 391 aaPredicted RBP11.47□□□□□ -0.57
TPM1-216ENST00000558910 NCF1CA8MVU1 366 aaPredicted RBP11.47□□□□□ -0.57
TPM1-216ENST00000558910 MKRN2OSH3BPM6 223 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 GFYI3L273 518 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 CDC7O00311 574 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 FAM155BO75949 473 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 CCNDBP1O95273 360 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 SERPIND1P05546 499 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 RAB40ALP0C0E4 278 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 HIST1H2AGP0C0S8 130 aaPredicted RBP11.47□□□□□ -0.57
TPM1-216ENST00000558910 NCF1P14598 390 aaPredicted RBP11.47□□□□□ -0.57
TPM1-216ENST00000558910 HIST1H2ADP20671 130 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 FDXRP22570 491 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 SLC12A2P55011 1212 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 TAS2R39P59534 338 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 GUCY2DQ02846 1103 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 CKAP4Q07065 602 aaKnown RBP11.47□□□□□ -0.57
TPM1-216ENST00000558910 GRM7Q14831 915 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 EFTUD2Q15029 972 aaKnown RBP eCLIP11.47□□□□□ -0.57
TPM1-216ENST00000558910 LACTB2Q53H82 288 aaPredicted RBP11.47□□□□□ -0.57
TPM1-216ENST00000558910 FBXO48Q5FWF7 155 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 TCTE1Q5JU00 501 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 PRAMEF13Q5VWM6 474 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 ZNF385CQ66K41 422 aaPredicted RBP11.47□□□□□ -0.57
TPM1-216ENST00000558910 AGTRAPQ6RW13 159 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 TMEM207Q6UWW9 146 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 C3orf62Q6ZUJ4 267 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 PAQR7Q86WK9 346 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 CSNK1A1LQ8N752 337 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 HMGCLL1Q8TB92 370 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 ZCCHC10Q8TBK6 192 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 FBXO25Q8TCJ0 367 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 EXT2Q93063 718 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 HIST1H2AHQ96KK5 128 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 CCDC138Q96M89 665 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 LRFN5Q96NI6 719 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 HIST1H2AJQ99878 128 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 EGFL8Q99944 293 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 ZFYVE21Q9BQ24 234 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 PLCD4Q9BRC7 762 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 H2AFJQ9BTM1 129 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 RAB17Q9H0T7 212 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 ING2Q9H160 280 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 PARVBQ9HBI1 364 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 SLC22A11Q9NSA0 550 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 LUZP4Q9P127 313 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 TXNDC16Q9P2K2 825 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms