RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 IGKV1-8A0A0C4DH67 115 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 SUPT3HB4E1H0 165 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 H3BMH7 237 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 ZSCAN9O15535 394 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-234ENST00000557703 UGDHO60701 494 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 SMIM24O75264 130 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 GLRA3O75311 464 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 SUPT3HO75486 399 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 SCRG1O75711 98 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 STK17BO94768 372 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 DLGAP3O95886 979 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 MTHFD2P13995 350 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 GFAPP14136 432 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 PSMB5P28074 263 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 CRHR1P34998 444 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 AHRP35869 848 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 EIF2S3P41091 472 aaKnown RBP13.12□□□□□ -0.31
SHMT2-234ENST00000557703 CASP2P42575 452 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 KCNC1P48547 511 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 NFKB2Q00653 900 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 IRF9Q00978 393 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 CDC16Q13042 620 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 LAPTM5Q13571 262 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 E2F2Q14209 437 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 KCNAB1Q14722 419 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 NAA30Q147X3 362 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-234ENST00000557703 SETDB1Q15047 1291 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 TBCCQ15814 346 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 ZXDCQ2QGD7 858 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-234ENST00000557703 RHBDD2Q6NTF9 364 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 FBXO42Q6P3S6 717 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 C6orf15Q6UXA7 325 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-234ENST00000557703 MBOAT1Q6ZNC8 495 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 SH2D5Q6ZV89 423 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 SLC22A9Q8IVM8 553 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 MDM1Q8TC05 714 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 SLC5A11Q8WWX8 675 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 MVB12AQ96EY5 273 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 MAGEB10Q96LZ2 347 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-234ENST00000557703 AIF1LQ9BQI0 150 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 STMN4Q9H169 189 aaPredicted RBP13.12□□□□□ -0.31
SHMT2-234ENST00000557703 NT5DC2Q9H857 520 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 SLC6A20Q9NP91 592 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 COPG2Q9UBF2 871 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 PADI1Q9ULC6 663 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 PLAAQ9Y263 795 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 DMXL2Q8TDJ6 3036 aa13.12□□□□□ -0.31
SHMT2-234ENST00000557703 TRBC2A0A5B9 178 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 TLDC2A0PJX2 215 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 KRT87PA6NCN2 255 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 NCF1BA6NI72 391 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-234ENST00000557703 NCF1CA8MVU1 366 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-234ENST00000557703 H7BY64 318 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 K7EPI3 171 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 CLGNO14967 610 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 WDR47O94967 919 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 RECKO95980 971 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 PYGBP11216 843 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 PIM1P11309 404 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-234ENST00000557703 NCF1P14598 390 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-234ENST00000557703 EPB42P16452 691 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 SLC18A2Q05940 514 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 PWP1Q13610 501 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 GPR19Q15760 415 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 PDK4Q16654 411 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 PAGE2BQ5JRK9 111 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 BEND6Q5SZJ8 279 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-234ENST00000557703 C10orf62Q5T681 223 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-234ENST00000557703 BROXQ5VW32 411 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 ATG9BQ674R7 924 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 PWWP2BQ6NUJ5 590 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 NXPE4Q6UWF7 544 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 ZNF517Q6ZMY9 492 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-234ENST00000557703 KRT78Q8N1N4 520 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 PLD6Q8N2A8 252 aaKnown RBP13.11□□□□□ -0.31
SHMT2-234ENST00000557703 TTC29Q8NA56 475 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-234ENST00000557703 TRPV3Q8NET8 790 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 MYRIPQ8NFW9 859 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 OR1L3Q8NH93 324 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 RDH11Q8TC12 318 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 EPS8L3Q8TE67 593 aaKnown RBP13.11□□□□□ -0.31
SHMT2-234ENST00000557703 KCNE4Q8WWG9 221 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 UBE2E3Q969T4 207 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 PYCR2Q96C36 320 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 WDR34Q96EX3 536 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 SCYL1Q96KG9 808 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 PRAP1Q96NZ9 151 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 OR2A5Q96R48 311 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 OR4K3Q96R72 315 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 NDC1Q9BTX1 674 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 EFCAB11Q9BUY7 163 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 C1QTNF3Q9BXJ4 246 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 SLC7A5P2Q9GIP4 190 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 ACTR5Q9H9F9 607 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-234ENST00000557703 APMAPQ9HDC9 416 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 PCMTD2Q9NV79 361 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 FOXJ2Q9P0K8 574 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 OPTCQ9UBM4 332 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 ADGRE2Q9UHX3 823 aa13.11□□□□□ -0.31
SHMT2-234ENST00000557703 EPG5Q9HCE0 2579 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms