RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ZNF582Q96NG8 517 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 INPP5KQ9BT40 448 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 ANKRD2Q9GZV1 360 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 VCX3BQ9H321 246 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 APOBEC3GQ9HC16 384 aaKnown RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 SDR39U1Q9NRG7 319 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 HOMER3Q9NSC5 361 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 DDX18Q9NVP1 670 aaKnown RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 FAM118AQ9NWS6 357 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 B3GAT1Q9P2W7 334 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 MAN1B1Q9UKM7 699 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 EXOC6BQ9Y2D4 811 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 ARHGEF17Q96PE2 2063 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 EEA1Q15075 1411 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 GOLGA6L7A0A1B0GV03 622 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 A8MV72 311 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 ATP6V0E1O15342 81 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 KHDRBS3O75525 346 aaKnown RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 GOSR1O95249 250 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 HSPA4LO95757 839 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 ERVK-10P10266 1014 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 EPB41P11171 864 aaKnown RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 HPGDP15428 266 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 GCFC2P16383 781 aaKnown RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 HSPA4P34932 840 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 IL15P40933 162 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 NPY4RP50391 375 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 DLX5P56178 289 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 ERVFC1-1P60608 527 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 PLOD1Q02809 727 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 TRAP1Q12931 704 aaKnown RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 SYCP1Q15431 976 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 ANKDD1AQ495B1 522 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 ZNF672Q499Z4 452 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 C9orf139Q6ZV77 190 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 GALNTL5Q7Z4T8 443 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 ADCK2Q7Z695 626 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 ZNF554Q86TJ5 538 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 LONP2Q86WA8 852 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 OR2T12Q8NG77 320 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 GOT1L1Q8NHS2 421 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 LMO3Q8TAP4 145 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 ZFAND2BQ8WV99 257 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 SLC5A11Q8WWX8 675 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 CTNNBL1Q8WYA6 563 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 MR1Q95460 341 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 TMIGD2Q96BF3 282 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 MAP3K3Q99759 626 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 TEX13BQ9BXU2 312 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 ACPTQ9BZG2 426 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 OPA3Q9H6K4 179 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 ZWILCHQ9H900 591 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 TM9SF3Q9HD45 589 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 SDHAF3Q9NRP4 125 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 PNPLA3Q9NST1 481 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 IL37Q9NZH6 218 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.58□□□□□ -2.16
HIF1A-212ENST00000557538 FAM153AQ9UHL3 310 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 TMED5Q9Y3A6 229 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 CUX2O14529 1486 aa1.58□□□□□ -2.16
HIF1A-212ENST00000557538 LOC101059948A0A1B0GTJ6 334 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 ZSCAN5CA6NGD5 496 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 YDJCA8MPS7 323 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 TMEM178BH3BS89 294 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 ZBTB43O43298 467 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 XRCC3O43542 346 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 ATP6V1G1O75348 118 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 CBR3O75828 277 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 PIGNO95427 931 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 TGDSO95455 350 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 NADKO95544 446 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 APOHP02749 345 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 PLA2G4BP0C869 781 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 KRT13P13646 458 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 CTRB1P17538 263 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 NR1D1P20393 614 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 MC5RP33032 325 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 CTNNA1P35221 906 aaKnown RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 CDKN1AP38936 164 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 FNTAP49354 379 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 AMPHP49418 695 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 THOP1P52888 689 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 HUNKP57058 714 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 YBEYP58557 167 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-212ENST00000557538 CBX1P83916 185 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 PPA1Q15181 289 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 STK11Q15831 433 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 GTDC1Q4AE62 458 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 C9orf50Q5SZB4 431 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 FAM91A1Q658Y4 838 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 CTRB2Q6GPI1 263 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 C11orf63Q6NUN7 778 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 MFSD12Q6NUT3 480 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 C8orf74Q6P047 294 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 CORO6Q6QEF8 472 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 C19orf48Q6RUI8 117 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 MOXD1Q6UVY6 613 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 ZYG11AQ6WRX3 759 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 PHLDB2Q86SQ0 1253 aa1.57□□□□□ -2.16
HIF1A-212ENST00000557538 MFN1Q8IWA4 741 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms