RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 OR52A5Q9H2C5 316 aa9.52□□□□□ -0.89
HNRNPC-228ENST00000557033 TFB2MQ9H5Q4 396 aaKnown RBP9.52□□□□□ -0.89
HNRNPC-228ENST00000557033 MVB12BQ9H7P6 319 aa9.52□□□□□ -0.89
HNRNPC-228ENST00000557033 COG4Q9H9E3 785 aa9.52□□□□□ -0.89
HNRNPC-228ENST00000557033 STARD5Q9NSY2 213 aa9.52□□□□□ -0.89
HNRNPC-228ENST00000557033 NOP53Q9NZM5 478 aaKnown RBP9.52□□□□□ -0.89
HNRNPC-228ENST00000557033 PAK5Q9P286 719 aa9.52□□□□□ -0.89
HNRNPC-228ENST00000557033 TNFRSF10DQ9UBN6 386 aa9.52□□□□□ -0.89
HNRNPC-228ENST00000557033 PRSS50Q9UI38 385 aa9.52□□□□□ -0.89
HNRNPC-228ENST00000557033 RARRES3Q9UL19 164 aa9.52□□□□□ -0.89
HNRNPC-228ENST00000557033 PADI1Q9ULC6 663 aa9.52□□□□□ -0.89
HNRNPC-228ENST00000557033 CORO2BQ9UQ03 480 aa9.52□□□□□ -0.89
HNRNPC-228ENST00000557033 AHCTF1Q8WYP5 2266 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 OR6C74A6NCV1 312 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 PRAMEF25A6NGN4 478 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 LIN7AO14910 233 aaPredicted RBP9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 NKX2-8O15522 239 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 FRS3O43559 492 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 APOL3O95236 402 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 ZBTB11O95625 1053 aaPredicted RBP9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 IFNB1P01574 187 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 FTH1P02794 183 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 ESR1P03372 595 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 FOLR1P15328 257 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 ITGB6P18564 788 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 PPARGP37231 505 aaPredicted RBP9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 CCR10P46092 362 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 MAP2K6P52564 334 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 PPP1CAP62136 330 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 ACVR1Q04771 509 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 MALLQ13021 153 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 TUBB3Q13509 450 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 MYBPC3Q14896 1274 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 TSTD2Q5T7W7 516 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 DUS1LQ6P1R4 473 aaKnown RBP9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 PPP1R21Q6ZMI0 780 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 CILP2Q8IUL8 1156 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 LRRC8AQ8IWT6 810 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 PIANPQ8IYJ0 282 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 UNC5BQ8IZJ1 945 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 LILRA3Q8N6C8 439 aaPredicted RBP9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 CLDN19Q8N6F1 224 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 CCDC89Q8N998 374 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 OR4E2Q8NGC2 313 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 OR8K5Q8NH50 307 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 NAT14Q8WUY8 206 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 C1orf54Q8WWF1 131 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 LCN9Q8WX39 176 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.51□□□□□ -0.893e-11■■■■■ 36.6
HNRNPC-228ENST00000557033 STAMBPL1Q96FJ0 436 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 ELMO2Q96JJ3 720 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 JMJD8Q96S16 334 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 SRMSQ9H3Y6 488 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 SYTL2Q9HCH5 934 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 FGF21Q9NSA1 209 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 HOMER3Q9NSC5 361 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 PIH1D1Q9NWS0 290 aaKnown RBP9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 SMARCAL1Q9NZC9 954 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 KCND3Q9UK17 655 aa9.51□□□□□ -0.89
HNRNPC-228ENST00000557033 CCDC162PA2VCL2 907 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 J3QKU1 62 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 KIAA0754O94854 1291 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 APRTP07741 180 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 OR56A5P0C7T3 313 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 MSL3P1P0C860 447 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 PRSS56P0CW18 603 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 TCN2P20062 427 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 PDHA2P29803 388 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 FOXN2P32314 431 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 RPL22P35268 128 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 DLSTP36957 453 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 STT3AP46977 705 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 CLCN7P51798 805 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 KPNA2P52292 529 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 CORO7P57737 925 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 TUBB4BP68371 445 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 CDC20Q12834 499 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 SNX1Q13596 522 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 TUBB2AQ13885 445 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 BOP1Q14137 746 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 CCDC38Q502W7 563 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 ZNF385CQ66K41 422 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 AFTPHQ6ULP2 937 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 AMIGO1Q86WK6 493 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 TRIM58Q8NG06 486 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 OR13J1Q8NGT2 312 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 OR4L1Q8NH43 312 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 STARD8Q92502 1023 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 TFGQ92734 400 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 HDAC10Q969S8 669 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 TUBB2BQ9BVA1 445 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 GPR87Q9BY21 358 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 SLC25A18Q9H1K4 315 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 LZTFL1Q9NQ48 299 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 LHX9Q9NQ69 397 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 EIF2B3Q9NR50 452 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 KCND1Q9NSA2 647 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 ASH2LQ9UBL3 628 aa9.5□□□□□ -0.89
HNRNPC-228ENST00000557033 FBLN5Q9UBX5 448 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms