RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 CSNK1A1LQ8N752 337 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 AMER3Q8N944 861 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 METTL21AQ8WXB1 218 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 PEX13Q92968 403 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 ZNF354BQ96LW1 612 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 GPR137Q96N19 417 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 PLCD4Q9BRC7 762 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 MCCC2Q9HCC0 563 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 SPATA7Q9P0W8 599 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 MKL2Q9ULH7 1088 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 TFR2Q9UP52 801 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 RUVBL1Q9Y265 456 aaKnown RBP11.27□□□□□ -0.61
ACTN1-221ENST00000556571 MEMO1Q9Y316 297 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 NFS1Q9Y697 457 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 CACNA1CQ13936 2221 aa11.27□□□□□ -0.61
ACTN1-221ENST00000556571 A8MUI8 341 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 FAM227AF5H4B4 570 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 TXNDC9O14530 226 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 C8orf89P0DMQ9 161 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 BDKRB1P46663 353 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 TTPAP49638 278 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 GDF10P55107 478 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 ALDH6A1Q02252 535 aaKnown RBP11.26□□□□□ -0.61
ACTN1-221ENST00000556571 TLE4Q04727 773 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 SEMA3AQ14563 771 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 CDSNQ15517 529 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 ACER2Q5QJU3 275 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 AADACL2Q6P093 401 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 OTOAQ7RTW8 1153 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 ZC3H7AQ8IWR0 971 aaKnown RBP11.26□□□□□ -0.61
ACTN1-221ENST00000556571 TAB3Q8N5C8 712 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-221ENST00000556571 ALG3Q92685 438 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 ZNF778Q96MU6 729 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 ACAT2Q9BWD1 397 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 DRC3Q9H069 523 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 ENKD1Q9H0I2 346 aa11.26□□□□□ -0.61
ACTN1-221ENST00000556571 MRPS30Q9NP92 439 aaKnown RBP11.26□□□□□ -0.61
ACTN1-221ENST00000556571 UTP6Q9NYH9 597 aaKnown RBP11.26□□□□□ -0.61
ACTN1-221ENST00000556571 NCOA6Q14686 2063 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-221ENST00000556571 A0A0A6YYC8 382 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-221ENST00000556571 I3L1I5 382 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-221ENST00000556571 FOXS1O43638 330 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 NRDCO43847 1150 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 SUN1O94901 812 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 CYC1P08574 325 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 PKMP14618 531 aaKnown RBP11.25□□□□□ -0.61
ACTN1-221ENST00000556571 YBX1P67809 324 aaKnown RBP11.25□□□□□ -0.61
ACTN1-221ENST00000556571 RELAQ04206 551 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 KIF5AQ12840 1032 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 FAM53BQ14153 422 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 FASTKQ14296 549 aaKnown RBP11.25□□□□□ -0.61
ACTN1-221ENST00000556571 HKDC1Q2TB90 917 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 PLAG1Q6DJT9 500 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 H3F3CQ6NXT2 135 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 PPP1R21Q6ZMI0 780 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 LDB1Q86U70 411 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-221ENST00000556571 PAQR7Q86WK9 346 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 LRRC6Q86X45 466 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 SMPDL3AQ92484 453 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 RERGQ96A58 199 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-221ENST00000556571 OR2A5Q96R48 311 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 TMEM121Q9BTD3 319 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 P2RY12Q9H244 342 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 CATSPERZQ9NTU4 200 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 C19orf25Q9UFG5 118 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-221ENST00000556571 GNPTGQ9UJJ9 305 aa11.25□□□□□ -0.61
ACTN1-221ENST00000556571 KRT87PA6NCN2 255 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 ASPDHA6ND91 283 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 NPIPA5E9PKD4 350 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 FANCGO15287 622 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 CD3EAPO15446 510 aaKnown RBP11.24□□□□□ -0.61
ACTN1-221ENST00000556571 NDUFS3O75489 264 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 SEC24DO94855 1032 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-221ENST00000556571 CD46P15529 392 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 CD1EP15812 388 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 RPS3P23396 243 aaKnown RBP eCLIP11.24□□□□□ -0.614e-6■■□□□ 13.1
ACTN1-221ENST00000556571 EEF1DP29692 281 aaKnown RBP11.24□□□□□ -0.61
ACTN1-221ENST00000556571 STIP1P31948 543 aaKnown RBP11.24□□□□□ -0.61
ACTN1-221ENST00000556571 RPA3P35244 121 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-221ENST00000556571 AVPR1BP47901 424 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 MAT1AQ00266 395 aaKnown RBP11.24□□□□□ -0.61
ACTN1-221ENST00000556571 PRDX1Q06830 199 aaKnown RBP11.24□□□□□ -0.61
ACTN1-221ENST00000556571 TUBA3CQ13748 450 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 ARHGAP19Q14CB8 494 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 NDUFA9Q16795 377 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 MEP1AQ16819 746 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 SYT16Q17RD7 645 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 BTBD16Q32M84 506 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 ANKRD20A4Q4UJ75 823 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 TUBA3EQ6PEY2 450 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 RAD9BQ6WBX8 426 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 CPEB2Q7Z5Q1 589 aaKnown RBP11.24□□□□□ -0.61
ACTN1-221ENST00000556571 EID3Q8N140 333 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 BEST3Q8N1M1 668 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 MPP5Q8N3R9 675 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 ARHGEF39Q8N4T4 335 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 AMER2Q8N7J2 671 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 TMEM178AQ8NBL3 297 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 ACBD4Q8NC06 268 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 MDS2Q8NDY4 140 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms