RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 DGUOKQ16854 277 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 VMACQ2NL98 169 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 TXNDC8Q6A555 127 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 NIPAL1Q6NVV3 410 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 LINC00299Q6ZSB3 139 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 SLC16A12Q6ZSM3 486 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ZNF621Q6ZSS3 439 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 TMEM150AQ86TG1 271 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ADCK1Q86TW2 530 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 SLCO6A1Q86UG4 719 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ZBTB46Q86UZ6 589 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 RBM12BQ8IXT5 1001 aaKnown RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 TCEAL8Q8IYN2 117 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 RNF168Q8IYW5 571 aaPredicted RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 PGBD3Q8N328 593 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CPXM2Q8N436 756 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ATG16L2Q8NAA4 619 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 VPS37AQ8NEZ2 397 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 OR10Q1Q8NGQ4 319 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CDC26Q8NHZ8 85 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 FIBINQ8TAL6 211 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ADAMTS19Q8TE59 1207 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 FBLIM1Q8WUP2 373 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ITFG2Q969R8 447 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 DEFB118Q96PH6 123 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 SPATA9Q9BWV2 254 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 REXO4Q9GZR2 422 aaKnown RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 RNF208Q9H0X6 261 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ABCG8Q9H221 673 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 SUV39H2Q9H5I1 410 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 ZDHHC6Q9H6R6 413 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 EPS8L2Q9H6S3 715 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 NECTIN3Q9NQS3 549 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 MRPL17Q9NRX2 175 aaKnown RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 KRT84Q9NSB2 600 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 EXD2Q9NVH0 621 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 GPRC5BQ9NZH0 403 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 CFAP97Q9P2B7 532 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 SLC25A13Q9UJS0 675 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 INTS6Q9UL03 887 aaKnown RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 PPT2Q9UMR5 302 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 SAMHD1Q9Y3Z3 626 aaKnown RBP6.79□□□□□ -1.32
TDP1-213ENST00000555880 SCN5AQ14524 2016 aa6.79□□□□□ -1.32
TDP1-213ENST00000555880 KIAA1671Q9BY89 1806 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 A0A1W2PQ67 120 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 hCG_2039718K7EN88 272 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 XPNPEP2O43895 674 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 GREM1O60565 184 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 PQBP1O60828 265 aaKnown RBP6.78□□□□□ -1.32
TDP1-213ENST00000555880 MITFO75030 526 aaPredicted RBP6.78□□□□□ -1.32
TDP1-213ENST00000555880 FAM20BO75063 409 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 JRKO75564 520 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 SULT1C4O75897 302 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 GABARAPO95166 117 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 PARNO95453 639 aaKnown RBP6.78□□□□□ -1.32
TDP1-213ENST00000555880 CPSF4O95639 269 aaKnown RBP6.78□□□□□ -1.32
TDP1-213ENST00000555880 OLFM2O95897 454 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 ATP1B2P14415 290 aaPredicted RBP6.78□□□□□ -1.32
TDP1-213ENST00000555880 PORP16435 677 aaPredicted RBP6.78□□□□□ -1.32
TDP1-213ENST00000555880 PCMT1P22061 227 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 CDH3P22223 829 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 FMO3P31513 532 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 CD70P32970 193 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 GRK3P35626 688 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 HPCAL1P37235 193 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 OPRL1P41146 370 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 ASMTP46597 345 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 GP2P55259 537 aaKnown RBP6.78□□□□□ -1.32
TDP1-213ENST00000555880 B4GALNT1Q00973 533 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 SEMG2Q02383 582 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 EMX1Q04741 257 aaPredicted RBP6.78□□□□□ -1.32
TDP1-213ENST00000555880 ACSM2AQ08AH3 577 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 SFSWAPQ12872 951 aaKnown RBP6.78□□□□□ -1.32
TDP1-213ENST00000555880 MTAPQ13126 283 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 RAB33AQ14088 237 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 NPTX1Q15818 432 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 CTF1Q16619 201 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 SYTL3Q4VX76 610 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 XKR6Q5GH73 641 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 DGKKQ5KSL6 1271 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 KIAA1614Q5VZ46 1190 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 LIPJQ5W064 366 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 ACSM2BQ68CK6 577 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 ANKRD34AQ69YU3 496 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 KDM4DQ6B0I6 523 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 C22orf39Q6P5X5 142 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 CCDC81Q6ZN84 652 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 NEK10Q6ZWH5 1172 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 HTR3DQ70Z44 454 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 B3GNT8Q7Z7M8 397 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 TSPYL5Q86VY4 417 aaPredicted RBP6.78□□□□□ -1.32
TDP1-213ENST00000555880 P2RY8Q86VZ1 359 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 ZSWIM9Q86XI8 627 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 ZZZ3Q8IYH5 903 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 C10orf111Q8N326 155 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 TTC29Q8NA56 475 aaPredicted RBP6.78□□□□□ -1.32
TDP1-213ENST00000555880 ZNF540Q8NDQ6 660 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 FAR1Q8WVX9 515 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 ASZ1Q8WWH4 475 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 ATL1Q8WXF7 558 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms