RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 ANKRD20A4Q4UJ75 823 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 LGSNQ5TDP6 509 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 FCRL6Q6DN72 434 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 TLDC1Q6P9B6 456 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 AFTPHQ6ULP2 937 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 IGFL3Q6UXB1 125 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 CAPN12Q6ZSI9 719 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 LDB1Q86U70 411 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-215ENST00000554656 TAX1BP1Q86VP1 789 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 ZGRF1Q86YA3 2104 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 CISD2Q8N5K1 135 aaKnown RBP10.14□□□□□ -0.79
SHMT2-215ENST00000554656 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.14□□□□□ -0.79
SHMT2-215ENST00000554656 DCAKDQ8WVC6 231 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-215ENST00000554656 MTBPQ96DY7 904 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 CERS2Q96G23 380 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 MESP1Q9BRJ9 268 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 SSU72Q9NP77 194 aaKnown RBP10.14□□□□□ -0.79
SHMT2-215ENST00000554656 CUEDC1Q9NWM3 386 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-215ENST00000554656 MAP10Q9P2G4 905 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 NDOR1Q9UHB4 597 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 GPN3Q9UHW5 284 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-215ENST00000554656 ERRFI1Q9UJM3 462 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-215ENST00000554656 ADAM21Q9UKJ8 722 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 PLCL2Q9UPR0 1127 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 B3GNT3Q9Y2A9 372 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 TCAF1Q9Y4C2 921 aa10.14□□□□□ -0.79
SHMT2-215ENST00000554656 ZCWPW2A0A1B0GU75 182 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 SMIM23A6NLE4 172 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 POLR3GO15318 223 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-215ENST00000554656 PRICKLE3O43900 615 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-215ENST00000554656 NRP2O60462 931 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 KRT38O76015 456 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 CBX6O95503 412 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 CLDN1O95832 211 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 LDLRP01130 860 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 PAMP19021 973 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 COL8A1P27658 744 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 PSMB5P28074 263 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 SLCO1A2P46721 670 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 RAB28P51157 221 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 SOX8P57073 446 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 HSPA14Q0VDF9 509 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 KIAA0930Q6ICG6 404 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-215ENST00000554656 CUZD1Q86UP6 607 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 TRABD2AQ86V40 505 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 EXOC3L1Q86VI1 746 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 MCATQ8IVS2 390 aaKnown RBP10.13□□□□□ -0.79
SHMT2-215ENST00000554656 LMNTD2Q8IXW0 634 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 CLEC1AQ8NC01 280 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 OR4L1Q8NH43 312 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 ZNF669Q96BR6 464 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-215ENST00000554656 ALKBH8Q96BT7 664 aaKnown RBP10.13□□□□□ -0.79
SHMT2-215ENST00000554656 FER1L6-AS2Q96M78 137 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 IP6K3Q96PC2 410 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 SPSB2Q99619 263 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 BARD1Q99728 777 aaKnown RBP10.13□□□□□ -0.79
SHMT2-215ENST00000554656 C17orf62Q9BQA9 187 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 SLC29A3Q9BZD2 475 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 SLC6A20Q9NP91 592 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 TXLNGQ9NUQ3 528 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 FBXL4Q9UKA2 621 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 G3BP2Q9UN86 482 aaKnown RBP10.13□□□□□ -0.79
SHMT2-215ENST00000554656 RUVBL2Q9Y230 463 aaKnown RBP10.13□□□□□ -0.79
SHMT2-215ENST00000554656 PCDHGA10Q9Y5H3 936 aa10.13□□□□□ -0.79
SHMT2-215ENST00000554656 LRBAP50851 2863 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 A0A1B0GX78 115 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 WIPF3A6NGB9 483 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 PEX12O00623 359 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 SOCS6O14544 535 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 CTSVO60911 334 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 SLCO2B1O94956 709 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 ONECUT2O95948 504 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 SNRPAP09012 282 aaKnown RBP10.12□□□□□ -0.79
SHMT2-215ENST00000554656 CD9P21926 228 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 AOAHP28039 575 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 GRIA3P42263 894 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 BDKRB1P46663 353 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 CRADDP78560 199 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 CBX1P83916 185 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 PLOD1Q02809 727 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-215ENST00000554656 TMED2Q15363 201 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 CCSMST1Q4G0I0 132 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 LYPLAL1Q5VWZ2 237 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 TRMT10BQ6PF06 316 aaKnown RBP10.12□□□□□ -0.79
SHMT2-215ENST00000554656 FIGLAQ6QHK4 219 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 Q6ZS92 163 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 TTLL10Q6ZVT0 673 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 DCUN1D3Q8IWE4 304 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 CNTN4Q8IWV2 1026 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 OR6P1Q8NGX9 317 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 OR2L8Q8NGY9 312 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 CFAP61Q8NHU2 1237 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 PRR7Q8TB68 274 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 MZB1Q8WU39 189 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 FKBP10Q96AY3 582 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 PTERQ96BW5 349 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 ZNF285Q96NJ3 590 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 CPNE1Q99829 537 aa10.12□□□□□ -0.79
SHMT2-215ENST00000554656 NDC1Q9BTX1 674 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms